| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3705 |
|---|
| Symbol | |
|---|
| ID | 8335058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 4156969 |
|---|
| End bp | 4157991 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644956845 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003114448 |
|---|
| Protein GI | 256392884 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0259788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTACCA AACTCTCTGA CGTCGCCTCC TTCGCCGGCG TCAGTCTGGC CACTGTCCGC
CGGGTCCTGA ACGACCAGCC GTTCATAGCC CAGGAGACCC GCGACCGCGT CCTGACCGCC
CTGGACGTCC TGGGCCACGA GCGTCCGGCC AAGTTCCGCC GCGGCCGGGC CGGGCTGGTC
GGATTGGTCG TCCCGGACCT GCAGAACCCG ATCTTCCCGG CCTTCGTGGA GTCGGTCTCG
GCCGGTCTGG TGAAACAGGG CCTGATGCCG GTGCTGTGCA CCCGGACCTC CGACGGGGTC
TCCGAGGCGA ACTACATCAA ACTCCTGATG GACCACGACG TCGCCGGCAT CGTCTTCATC
GGCTCCTCCT ACGCCGACGC GGGCCCGGAG TACTCCCGCG AGCTGCGCGA GCGCGGCATC
CCGCTGGTCC TGATCAACCC GGCCGACACC AACGAGAAAG TCTGCCGGGT CAGCGTCGAC
GACGCCGCGG CGGTGGACCA GGCCCTGAGC CATTTGGGCT CGCTCGGCCA CACGCGCGTC
GGCATGGTGC TGGGCCCGGT GGGCCACATC CCCTCGGCGC GCAAACTCGG TGCGTTCGTC
GCCCACTGCG AACGGACCGG CGCCGAACCG GGCGCGTGGC GGGATCTGGT CGTCCACACG
GGTTTCTCGA TCGAGGACGG CCGCGCCGCG ACCGCCCGGT TGCTGGCCTC CGATGCGGGC
GCCACGAACT GCACAGCCCT GATCTGCGCC AGCGACGCTC TGGCTCTGGG CGCCGTCCGC
GCGGCCTACC GGCTGGGCAT GAGCGTCCCG GGCGACCTGT CGGTCATCGG CTTCGACGAC
TCGCCCTACA TGATCGCCAC CGACCCGCCG CTGACGACGG TCCGGCAGCC GGTCCGCGCG
ATGGCCGCCG CCGCGGCCGA GGCCCTGAAG GCGCAGATCA GCGGACACGC CGTGCTCGGC
GAGGAGACGC TGTACGAGCC GGAGCTCATC GTGCGCGCCT CGACCGGCAT CGCGCGCCAC
TGA
|
|---|
| Protein sequence | MATKLSDVAS FAGVSLATVR RVLNDQPFIA QETRDRVLTA LDVLGHERPA KFRRGRAGLV
GLVVPDLQNP IFPAFVESVS AGLVKQGLMP VLCTRTSDGV SEANYIKLLM DHDVAGIVFI
GSSYADAGPE YSRELRERGI PLVLINPADT NEKVCRVSVD DAAAVDQALS HLGSLGHTRV
GMVLGPVGHI PSARKLGAFV AHCERTGAEP GAWRDLVVHT GFSIEDGRAA TARLLASDAG
ATNCTALICA SDALALGAVR AAYRLGMSVP GDLSVIGFDD SPYMIATDPP LTTVRQPVRA
MAAAAAEALK AQISGHAVLG EETLYEPELI VRASTGIARH
|
|---|
| |