| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3686 |
|---|
| Symbol | |
|---|
| ID | 8335039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 4125945 |
|---|
| End bp | 4126925 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644956826 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_003114429 |
|---|
| Protein GI | 256392865 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.82646 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGGC GGGCATTTCG GGACGCGGAA TCAGAGGGCG ATCTTGCTGA TGTCCGGGAT
GCCCCGCTTT CGCGGATGAC TGTGGACATC GCTATACCGG TTTATAATGA GGAGAGGGCG
CTTCCTGGGT GTATCGAGAC ATTGTGGACG TATCTCAGTG AGCGGTTTCC GTTCGCGTGG
GAAATCACGA TCGTCGACAA CGGGAGTACC GACGGTACGC TGCTCGCCGC TGAGGGGCTT
GCCTCGGCGT GGCCGTATGT GAGTGTGCTG CACCAGGACC GGAAGGGTAA GGGGCTGGCC
GTGCGTACGG CGTGGCTCGC CAGTACGGCG GATGTCGTCG CATATATGGA TGTGGACCTG
TCGACCGGGC TTGATGCGCT GCTGCCGATG GTTGCCTCGC TTGTCAATGG ACACGCCGAT
ATTGCGGTGG GGTCGCGGCT GGCTTCGGGC GCGCGGGTGA TTCGGGGTGT GAAGCGGGAT
ATCACGTCGC GGGGGTACAA CGCGCTGCTG CGACTGGTTC ACGGGGTGCG GTTCACGGAT
GCGCAATGCG GGTTCAAGGC GGCTCGGGCG GAAGTCGTCG TGCCGCTATT GCGGCGGGTG
CGGGACAATG GCTGGTTCTT TGACACCGAA TTGCTGCTGC TGGCCGAGCT CAACGGGCTC
CGGTTGCACG AGGTCGCCGT CGACTGGGTC GATGACGTCG CGAGCCAGGT GGCGATTCCG
CGCGTCGCGT CGGGCAACCT GCGCGGGATG CTGCGGCTCG CGCGCCTGCG GCTCCTCGGC
GCGGCGACGG TGAGCGGCCT TCCGCAGCGG CCCGCGCCGA CCGCGACGCA TCCCGACGCG
GTCCTGGGCC AGGCTCGCCG GGTCACGAGC CGACGCCGGT ACGCCAGCCG GGCGCCGGTC
CATCTGGCAG GCGCCGCCGC GCTGGTGGCG TATGTGATCA CTCGGTTCGT CGTCGCCGGT
CCCGGACGGC GCGCGCCGTA A
|
|---|
| Protein sequence | MSRRAFRDAE SEGDLADVRD APLSRMTVDI AIPVYNEERA LPGCIETLWT YLSERFPFAW
EITIVDNGST DGTLLAAEGL ASAWPYVSVL HQDRKGKGLA VRTAWLASTA DVVAYMDVDL
STGLDALLPM VASLVNGHAD IAVGSRLASG ARVIRGVKRD ITSRGYNALL RLVHGVRFTD
AQCGFKAARA EVVVPLLRRV RDNGWFFDTE LLLLAELNGL RLHEVAVDWV DDVASQVAIP
RVASGNLRGM LRLARLRLLG AATVSGLPQR PAPTATHPDA VLGQARRVTS RRRYASRAPV
HLAGAAALVA YVITRFVVAG PGRRAP
|
|---|
| |