| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3680 |
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| Symbol | |
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| ID | 8335033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4119460 |
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| End bp | 4120992 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644956820 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_003114423 |
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| Protein GI | 256392859 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGATCGC CGGAGCTGCT GATCGTCCTG CGCCGGGACC GCCCGACGCC GTTGCAGCAG
CAGGTCTGCG ACCAGGTCAT CGCCCTGGTG CGGGCCGGCC GGCTGCGCCC CGGGGACACG
GTTCCGGCGT CGCGGGAGCT GGCCCGGCAG TTGGACGTCT CGCGGACCGT GATCATCAAG
GCCTACGAGC TGCTGACCGC CAACGGCTAC CTGACCGCGC GCCCAGGTTC CGGGACCCGG
GTGGCCGGGC CGGAGCATCA TCAGGGCACG CCGACAGTGC CGAGCGCGGC GAAGCGAGCG
GTCGCGCTGG CGCCGCGTCC GCCGCGTCCC ACGGACGACG GGCACGCGCT GTGGCAGCCG
TGGGAACCGG CGCCGGTGTT GCGGCAGGCC GATCCCGCGG CGATCGATTT CCGGCACGGC
ACGCCGGCGC TGTCCCGGTT CCCGACCGCG CGCTGGCGGC AGTCGCTCGA GGCCGCGCTG
GCCAAGGCCG ACGACTCGCT GTTCGGATAC GGCCCGGCCG AGGGTTCGGC GGCCCTGCGC
GCCGAGATCG CCGCGTTGGT CCGGCACAGC AGGGCCCTTT CCGCCCCGGC GGAGCGCATC
ATGATCACCA GCGGTGCGAC GCAGGCCTTG GACATCTTGG TGCGGGCGAT CGTCGGGCCC
GGGGACGTCG TCGTCATCGA GGATCCCAGC CACACCGTGC TGCGGCAGAT CTTCGGGTTC
TCCCCGGCCG CGGTGGTGCC GGTGGCGGTG GACGACGAAG GGCTGCGGGT CCAGGACATC
GACGCCACGG TGCGCGCGCA CGGCCACGAT CCGGCGCGGG TGCGCCTGGT CTACGTCACG
CCGTCGCACC AGTTCCCGAC CGGCTGCGTG ATGACCGCGC AGCGGCGGCG CGCGCTGGTG
GGCTGGGCGC AGGAGCGCGG GGCGACGATC TTAGAGGACG ACTACCACAA CGAGTACTGG
TTCTCCGGGG ACCGGTTGCC GGCCCTGGCC GCCGACGCGC ACCAGGGCTC GGTGGTGTAT
GTCGGCAGCT TCAGCAAGAC GCTGTTCCCG GCGCTGCGCA TCGGCTACGC GATCCTGCCG
GAGCGGCTGG TGCAGCCGTT CCTGGGCATC AAGTGGATCA CCGACCGGCT CACCGCGACC
GTCGAGCAGG AGGCGCTGGC CGACTTCATC GCGACCGGCG GGTACGCCCG GCACATCGCG
AAGATGTCCG GGCTGTACCG GCGCCGGCGG CTGCGGTTGT TGGAGGCCTT GTACGAGTGC
TTCGGTGCCG GGGTGCGGAT CTCCGGGGAG GCGGCGGGGC TGCACGTGCT CGTCGCCTTG
CCCGGGCTGC TGGAGGCGGG CGTCGGCGAG GGCGAGTTCG CGCGGCGCGC CGCCGAGCGG
GGCGTGCTGA TCTATCCGGC TTCCGGGTAC TACGCGCAGG ACCCGCCGAC CGAACCCACC
TTTCTCATGG GGTACGCGGC GCTCACGCCG GAGCGCATCA CCGAGGGCGT CGCGCGGCTT
GCCGCCGTGC GCCGCCTGCG GGCTCCGGAG TGA
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| Protein sequence | MGSPELLIVL RRDRPTPLQQ QVCDQVIALV RAGRLRPGDT VPASRELARQ LDVSRTVIIK
AYELLTANGY LTARPGSGTR VAGPEHHQGT PTVPSAAKRA VALAPRPPRP TDDGHALWQP
WEPAPVLRQA DPAAIDFRHG TPALSRFPTA RWRQSLEAAL AKADDSLFGY GPAEGSAALR
AEIAALVRHS RALSAPAERI MITSGATQAL DILVRAIVGP GDVVVIEDPS HTVLRQIFGF
SPAAVVPVAV DDEGLRVQDI DATVRAHGHD PARVRLVYVT PSHQFPTGCV MTAQRRRALV
GWAQERGATI LEDDYHNEYW FSGDRLPALA ADAHQGSVVY VGSFSKTLFP ALRIGYAILP
ERLVQPFLGI KWITDRLTAT VEQEALADFI ATGGYARHIA KMSGLYRRRR LRLLEALYEC
FGAGVRISGE AAGLHVLVAL PGLLEAGVGE GEFARRAAER GVLIYPASGY YAQDPPTEPT
FLMGYAALTP ERITEGVARL AAVRRLRAPE
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