| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3666 |
|---|
| Symbol | |
|---|
| ID | 8335019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 4104751 |
|---|
| End bp | 4106154 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644956806 |
|---|
| Product | transcriptional regulator, GntR family with aminotransferase domain |
|---|
| Protein accession | YP_003114409 |
|---|
| Protein GI | 256392845 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCACAG ACCTCTCACT CACCGTCGAT CGCGAATCGG CCCTCCCCCT GTCCGAACAG
GTCCGCGGCA GCCTGCGCCG GCTCATCGAG GACGGCTCCC TGGGCGAGGA CTCGCCGCTG
CCGTCAAGCC GCCAGCTGGC CGCCGATCTG GCGGTCTCGC GCAGCGTCGT GGTGGAGGCC
TACGAGCAGT TGGTCGCCGA GGGCTACCTG GCGACCCGCC GCGGCTCCGG GACCCGGGTC
GCCAACGGCA TCGGCCGGCC CTCGGGCGCC GCTTCGGCGC TCACCAGGGC CCTGCCGGAG
CGCACGGAAT CGGCGTGGGA CCTGCGCACC GGTACCTCTG ACCTGGACGC CTTCCCGCGC
CGGGAGTGGG TGCGCTCGGT GACCGCGGCC CTGGCCCAGG CCGGGCGGGC CGAACTCGGC
TACGCCCCGC TCAGCGGCGC GCCGCACCTG CGCCACGTTC TGGCCGGGCA TCTGGGCCGC
ACCCGCGGCG TCCGGATCAG CCCGCAGAAC CTGATGATCA CTGCCGGCTT CGCCCAAGGG
CTGGCCCTGC TGTGCGCGAT GCTGCGGGAA AACGGCCACC GGGACCTGGG CGTGGAGGAC
CCCAGCCACC CCGGCGAGCG CGAGTTCATC GCCAGCGCGG GCCTACGCCC GGTCGGCATC
CCGGTGGACG CCGAAGGGCT GCGCGTGGAC CTGCTGGAGC GCAGCCCGGC GCGTGCCGTC
CTGACGACGC CGGGCAACCA GTTCCCCACC GGCGTGCGCC TGTCCCCGGC CCGCCGCGCA
CAGCTGATCG AGTGGGCCCG CAAGGTGGAC GGCTACATCC TGGAAGACGA CTTCGACTGC
GCCTACCTCG ACCGCGCCGA CCGCGTCCCG TCGCTGCAGA ACCTCGCCCC GGACCGCGTC
GTCTACGCCG GCAGCGTCAG CAAGGTCCTG GCACCGGCGC TGCGCCTGGG CTGGATCGCG
GGCCCCCCGG AGGTGATGTC CGGCGTCGAG GCGGTCCGCG CGGGCTGGGA CATCGGCTGC
TCAGGCCTGG AACAGCTGGC CTTCGCCCAT TTCGTCGCCA CCGGCGCCTA CGACCGCCAC
CAGCGAGCCC TGCGCACCGA ATCCCACAAG CGCAGGGCCC TGATCCGTAC CATGGTCGCT
GAACACTTCC CGGGCGCCCA CATGCTCGGC GGCGACAGCG GTATCCAGGC CTTCGTCACC
CTGCCATCGC ATATGGACGA ACAAGTCCTC GTCCGCGAGG CCCGCAACCG CTCGATCCTC
ATCCGCGGCG GCGCCTTCTA CACGCTGGAC GACCGCACCC GCCCGCCGGC CCTGGTCCTC
GGCTACGCCA CGATAGACGG CAAGGGCCTG CAGACGGCAC TGACGGCGCT GGGGGACATC
TACCGCTCGT GTGCGGTCAG ATGA
|
|---|
| Protein sequence | MATDLSLTVD RESALPLSEQ VRGSLRRLIE DGSLGEDSPL PSSRQLAADL AVSRSVVVEA
YEQLVAEGYL ATRRGSGTRV ANGIGRPSGA ASALTRALPE RTESAWDLRT GTSDLDAFPR
REWVRSVTAA LAQAGRAELG YAPLSGAPHL RHVLAGHLGR TRGVRISPQN LMITAGFAQG
LALLCAMLRE NGHRDLGVED PSHPGEREFI ASAGLRPVGI PVDAEGLRVD LLERSPARAV
LTTPGNQFPT GVRLSPARRA QLIEWARKVD GYILEDDFDC AYLDRADRVP SLQNLAPDRV
VYAGSVSKVL APALRLGWIA GPPEVMSGVE AVRAGWDIGC SGLEQLAFAH FVATGAYDRH
QRALRTESHK RRALIRTMVA EHFPGAHMLG GDSGIQAFVT LPSHMDEQVL VREARNRSIL
IRGGAFYTLD DRTRPPALVL GYATIDGKGL QTALTALGDI YRSCAVR
|
|---|
| |