Gene Caci_3660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3660 
Symbol 
ID8335013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand- 
Start bp4093809 
End bp4094408 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content69% 
IMG OID644956800 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003114403 
Protein GI256392839 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.880035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.502238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGACCG AATCCGCCCG GGCGCGCGCC ATGAACGAAA CCCGGAACCG CATCCTCGAC 
GTCGCCCTCG AGCTCCTGGG CCAGAACCCC GACGCGGGCA TGGCCGACAT CGCCTCCGCC 
GCCGGCGTGG TCCGCCGCAC CGTCTACGGC TACTTCCCCG CCCGCGCCGA CCTCGTGCAC 
ACCCTCGCCC GACGCGCCGT GGACGAGGTC GTAGCCGTAC TCACCCAAGT CAACGCCGCA 
CAGGCACCAC CCGAAGAAGT CTGGACCGAC TTCATCACCC ACCTCTGGCC CTTAGCCCGC 
CGCTACCGAG TCCTCCTAGC ACTCCGACGC GGCGAATACG GCGAAGAGAT CCACGCCCTC 
CTAGGACCAG TCGACGAAAT CCTCGCCAAC CTCGTACACC GAGGCCAGGA CCACCAGGTG 
TTCGGACGAC ACCTCCCCCC AACGGTCCTC AGCCAGGTCG CCTACGCCGC CGTATTCGCC 
ATCGCCGACA GCAGCCTCTC CAACCCAACC CTCAACGCCC GCGCCGCAAC CATCACAAGC 
CTCCTCATCC TCGGCGTCCC CGAAGCGCGC GCCACCGCCC TCGCGGATCG TCAGCGGTAG
 
Protein sequence
MQTESARARA MNETRNRILD VALELLGQNP DAGMADIASA AGVVRRTVYG YFPARADLVH 
TLARRAVDEV VAVLTQVNAA QAPPEEVWTD FITHLWPLAR RYRVLLALRR GEYGEEIHAL 
LGPVDEILAN LVHRGQDHQV FGRHLPPTVL SQVAYAAVFA IADSSLSNPT LNARAATITS 
LLILGVPEAR ATALADRQR