Gene Caci_3656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3656 
Symbol 
ID8335009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4089721 
End bp4090311 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content68% 
IMG OID644956796 
Product3-octaprenyl-4-hydroxybenzoate carboxy-lyase 
Protein accessionYP_003114399 
Protein GI256392835 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.982634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0200252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCT CCGGCCGGCT GGTGGTGGGG ATCAGCGGGG CTACGGGGAT CGCCTATGGG 
ATCAAAGTGT TGGAACTGGC GCGAAAAGCA GGTGTGGAAA CACATCTGGT GGTGACTCCC
GCCGGACAAC AGACCCGCGC CTACGAAACG GATCTGGACG CCCGCGACCT CGCGGCGATG
GCCGACGTCG CCTACCGGCC GGCCGACATC GGCGCCGCGA TCGCCTCCGG CTCCTTCCGG
ACCGCCGGGA TGATCGTCGC GCCGTGCTCG ATCAGAACCC TGTCAGCCAT CGCCTACTCC
AACGGCGACA ACCTGCTGAC CCGCGCTGCC GACGTCACCC TCAAGGAACG GCGCCGCCTG
GTCCTGATGG TGCGCGAAAC GCCGCTGACG CTGGGACATC TGCGTGCCAT GACCGCCGTC
ACCGAGTCCG GCGGCATCGT CATGCCTCCC GTCCCGGCCT TCTACCTGAA CCCGGCAAGT
GTCGCGGACA TCGTCGAGCA CACCGCCGGA CGCGCCCTGG ACCTGCTCGG CATCGACGTG
CCCGACCTGC CGCGCTGGGG CGAGAGCGCG GACAGCGCGA CCAACGGATG A
 
Protein sequence
MIGSGRLVVG ISGATGIAYG IKVLELARKA GVETHLVVTP AGQQTRAYET DLDARDLAAM 
ADVAYRPADI GAAIASGSFR TAGMIVAPCS IRTLSAIAYS NGDNLLTRAA DVTLKERRRL
VLMVRETPLT LGHLRAMTAV TESGGIVMPP VPAFYLNPAS VADIVEHTAG RALDLLGIDV
PDLPRWGESA DSATNG