Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3656 |
Symbol | |
ID | 8335009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4089721 |
End bp | 4090311 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956796 |
Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
Protein accession | YP_003114399 |
Protein GI | 256392835 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.982634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0200252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGCT CCGGCCGGCT GGTGGTGGGG ATCAGCGGGG CTACGGGGAT CGCCTATGGG ATCAAAGTGT TGGAACTGGC GCGAAAAGCA GGTGTGGAAA CACATCTGGT GGTGACTCCC GCCGGACAAC AGACCCGCGC CTACGAAACG GATCTGGACG CCCGCGACCT CGCGGCGATG GCCGACGTCG CCTACCGGCC GGCCGACATC GGCGCCGCGA TCGCCTCCGG CTCCTTCCGG ACCGCCGGGA TGATCGTCGC GCCGTGCTCG ATCAGAACCC TGTCAGCCAT CGCCTACTCC AACGGCGACA ACCTGCTGAC CCGCGCTGCC GACGTCACCC TCAAGGAACG GCGCCGCCTG GTCCTGATGG TGCGCGAAAC GCCGCTGACG CTGGGACATC TGCGTGCCAT GACCGCCGTC ACCGAGTCCG GCGGCATCGT CATGCCTCCC GTCCCGGCCT TCTACCTGAA CCCGGCAAGT GTCGCGGACA TCGTCGAGCA CACCGCCGGA CGCGCCCTGG ACCTGCTCGG CATCGACGTG CCCGACCTGC CGCGCTGGGG CGAGAGCGCG GACAGCGCGA CCAACGGATG A
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Protein sequence | MIGSGRLVVG ISGATGIAYG IKVLELARKA GVETHLVVTP AGQQTRAYET DLDARDLAAM ADVAYRPADI GAAIASGSFR TAGMIVAPCS IRTLSAIAYS NGDNLLTRAA DVTLKERRRL VLMVRETPLT LGHLRAMTAV TESGGIVMPP VPAFYLNPAS VADIVEHTAG RALDLLGIDV PDLPRWGESA DSATNG
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