Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3653 |
Symbol | |
ID | 8335006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4086310 |
End bp | 4087014 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644956793 |
Product | transcriptional regulator, MerR family |
Protein accession | YP_003114396 |
Protein GI | 256392832 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.885436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0353896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGA TGCGGATATC CCAGCTCGCG GAACGGACCG GCGTTCCGGC CACGACCTTG CGGTTCTACG AGGACGCCGG GCTGCTCACC GCCGATCGGA CCGCGGCGGG CTATCGCGTC TACGGCGAGG ACGCAGTGCG CCGGCTGACG TTCATCGGCG CCGCCAAGAA CCTGGGGCTG CCGTTGGAGG AGATCGGAGA ACTGCTCGCG GTCTGGCAGT CCGGGGCGTG CGCGGAGGTG AAAGCCGATC TTCGGCCGCG CCTTGCCGCG CGTGTGGCCG AAGCCGAGCA GCGGGCAGCC GACCTGGCGG CGCTCACGTG CACTTTGCAC TCAGCGCTGG ACCACCTCGA CGCCTTACCG GACCGTTCCG GTCCCTGCGG TCCCGAATGC GGCTTCCTCT CCCCCGCCGC CGCTGCCCCG GTGGCCTGCT CGCTGACCGG CGAGGCAATC GGCGAGCGGA CCGCGCAGTG GCGGGACGCC TTGGACTGCG CGGTCCGACA GCACGTCGAC CACGGGATAC GGCTCACCGT GCCGACCGAC CGCATCGCGG TTCTGGCCGA ATTGGCTGCC GCCGAACAGC GCTGCTGCCC GTTCTTCGAT TTTCGACTGC TGTTGGACGG CCCGCGGGTT CATCTGGAGG TGCGCGCCCC GGCCGAGGGC GCGTCGATGC TCACTGATGT GTTCCTGGAC GCTACCTCTC AGTAA
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Protein sequence | MTTMRISQLA ERTGVPATTL RFYEDAGLLT ADRTAAGYRV YGEDAVRRLT FIGAAKNLGL PLEEIGELLA VWQSGACAEV KADLRPRLAA RVAEAEQRAA DLAALTCTLH SALDHLDALP DRSGPCGPEC GFLSPAAAAP VACSLTGEAI GERTAQWRDA LDCAVRQHVD HGIRLTVPTD RIAVLAELAA AEQRCCPFFD FRLLLDGPRV HLEVRAPAEG ASMLTDVFLD ATSQ
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