Gene Caci_3653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3653 
Symbol 
ID8335006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4086310 
End bp4087014 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content70% 
IMG OID644956793 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003114396 
Protein GI256392832 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.885436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0353896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA TGCGGATATC CCAGCTCGCG GAACGGACCG GCGTTCCGGC CACGACCTTG 
CGGTTCTACG AGGACGCCGG GCTGCTCACC GCCGATCGGA CCGCGGCGGG CTATCGCGTC
TACGGCGAGG ACGCAGTGCG CCGGCTGACG TTCATCGGCG CCGCCAAGAA CCTGGGGCTG
CCGTTGGAGG AGATCGGAGA ACTGCTCGCG GTCTGGCAGT CCGGGGCGTG CGCGGAGGTG
AAAGCCGATC TTCGGCCGCG CCTTGCCGCG CGTGTGGCCG AAGCCGAGCA GCGGGCAGCC
GACCTGGCGG CGCTCACGTG CACTTTGCAC TCAGCGCTGG ACCACCTCGA CGCCTTACCG
GACCGTTCCG GTCCCTGCGG TCCCGAATGC GGCTTCCTCT CCCCCGCCGC CGCTGCCCCG
GTGGCCTGCT CGCTGACCGG CGAGGCAATC GGCGAGCGGA CCGCGCAGTG GCGGGACGCC
TTGGACTGCG CGGTCCGACA GCACGTCGAC CACGGGATAC GGCTCACCGT GCCGACCGAC
CGCATCGCGG TTCTGGCCGA ATTGGCTGCC GCCGAACAGC GCTGCTGCCC GTTCTTCGAT
TTTCGACTGC TGTTGGACGG CCCGCGGGTT CATCTGGAGG TGCGCGCCCC GGCCGAGGGC
GCGTCGATGC TCACTGATGT GTTCCTGGAC GCTACCTCTC AGTAA
 
Protein sequence
MTTMRISQLA ERTGVPATTL RFYEDAGLLT ADRTAAGYRV YGEDAVRRLT FIGAAKNLGL 
PLEEIGELLA VWQSGACAEV KADLRPRLAA RVAEAEQRAA DLAALTCTLH SALDHLDALP
DRSGPCGPEC GFLSPAAAAP VACSLTGEAI GERTAQWRDA LDCAVRQHVD HGIRLTVPTD
RIAVLAELAA AEQRCCPFFD FRLLLDGPRV HLEVRAPAEG ASMLTDVFLD ATSQ