| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3648 |
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| Symbol | |
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| ID | 8335001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4081725 |
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| End bp | 4082792 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644956788 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_003114391 |
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| Protein GI | 256392827 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0671959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA CGAACGCCCC GCCCGTGCGG TCCCCGCGAG CCGACGCGCA GTGGACTGAT
CCGGCGGCGC CGCGCGACGA CGACGAGTTC GTCCGCCGTG CCGACCCCTA CCGGCGCGAG
CTGCTGGTGC ACTGCTACCG CATGCTCGGC TCGGTGCACG ACGCCGAGGA CCTCGTGCAG
GAGACGTTCC TGCGCGCGTG GCGCGGCTAC GACCGGTTCG AGGGCCGCTC CTCGCTGCGC
ATCTGGCTCT ACCGGATCGC GACCAGCGCC TGCCTGACCG CCCTGGAGAA CCGGAGTCGG
CGGGTACTGC CGACGGGTCT GGGCGCCCCG GAGAAGGACG CCGAACGTCC CCTGCTGACC
GTCGCGGGCT CGGAGGTGCA GTGGCTCCAA CCGCTGCCGG ACGCCCTGGC GAGCGACCCG
GCGGCGATCG TGGCGGTGCG GGATTCGGTG CGTCTGGCGT TCATCGCCGC GTTGCAGCAC
CTGTCGGCCA AGCAGCGCGC GGTGCTGATC CTGCGCGACG TGATGGACTG GCACGCCGCC
GAGGTCGCGG ACCTGCTGGA CACCACGACG ATCGCGGTGA ACAGTGCACT GCGACGCGCC
CGGGCCCAGC TGGAGAAGGC CGCGCCGAGC CACGACGAGC TGACCGAGCC GGACGACCCG
CGCCGCCGGG ACCTGCTGCA TCAGTACACG ACCGCCTTCG AGAACGCCGA CGTCCCGGGG
CTCCTGCGGC TGCTGCGCGA CGACGTCGTG CTGGAGATGC CGCCGAACCT GGCGTGGTTC
GACGGCCGCA CGGCGGTCGG GACGTTCCTG GGCGCGAACG TGCTCGGCAG GCGGGCGTTC
ACGATGGTCA CGACCGCGGC GAACGGACAG GCGGCCGCCG CCGGCTACCT GGCCGGGCGG
GACGGGCGCC GGCACGCGCA CGCCATCCAG GTGCTGACCG CCACCTCCTC GGGCATCTCG
CACATCGTCT CGTTCAACGA CCCGGGCCTG TTCGCCGCCT TCGGTCTGCC CGCCGTCCTG
GACGGTGCGC AGCACGGCGT GGCCAGTGCC GGACCATGGC GGGGCTGA
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| Protein sequence | MIDTNAPPVR SPRADAQWTD PAAPRDDDEF VRRADPYRRE LLVHCYRMLG SVHDAEDLVQ
ETFLRAWRGY DRFEGRSSLR IWLYRIATSA CLTALENRSR RVLPTGLGAP EKDAERPLLT
VAGSEVQWLQ PLPDALASDP AAIVAVRDSV RLAFIAALQH LSAKQRAVLI LRDVMDWHAA
EVADLLDTTT IAVNSALRRA RAQLEKAAPS HDELTEPDDP RRRDLLHQYT TAFENADVPG
LLRLLRDDVV LEMPPNLAWF DGRTAVGTFL GANVLGRRAF TMVTTAANGQ AAAAGYLAGR
DGRRHAHAIQ VLTATSSGIS HIVSFNDPGL FAAFGLPAVL DGAQHGVASA GPWRG
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