| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3642 |
|---|
| Symbol | |
|---|
| ID | 8334995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 4076770 |
|---|
| End bp | 4077207 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644956782 |
|---|
| Product | histidine triad (HIT) protein |
|---|
| Protein accession | YP_003114385 |
|---|
| Protein GI | 256392821 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0807517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0488836 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACGG CGGTGCCTAG GGTGCGTGAG AGCGACTGCG TCTTCTGCGA GATCGTGGGC
GGTCGGGCTC CCTCCTACCG CGTCCTTGAG GACGTGCACG CCGTGGCGTT CCTGAACATC
AGACCTGCCG CCCCGGGCCA CACGCTAGTC GTCCCGCGTG TCCACGCACG CGATATGTGG
GAGATCTCAG AGGTCTCCCA TGGCCACGTC GCCGCGATGG CGCATCGAGT CGCCGCGCTG
CTGAACGCGA CACTCGCTCC CGACGGCGTG AACGTGAAGC ACAATACGGG CGAGGCCGCC
GGCCAGGACG TCTTCCACTT TCACGCGCAC GTGGTCCCGC GCTGGCATGG CGACAATCTG
CGGCTGGCAT GGAATTCGCC GTTAGCGCAG CCGGCTGAGC TGGAAGAGGT GCTGGAGCGG
GTGAGCGCCG GCCGGTGA
|
|---|
| Protein sequence | MSTAVPRVRE SDCVFCEIVG GRAPSYRVLE DVHAVAFLNI RPAAPGHTLV VPRVHARDMW
EISEVSHGHV AAMAHRVAAL LNATLAPDGV NVKHNTGEAA GQDVFHFHAH VVPRWHGDNL
RLAWNSPLAQ PAELEEVLER VSAGR
|
|---|
| |