Gene Caci_3623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3623 
Symbol 
ID8334976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4050984 
End bp4051781 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content70% 
IMG OID644956764 
Producthypothetical protein 
Protein accessionYP_003114367 
Protein GI256392803 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.337914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC CGACCCCCGT CGTTTTCATC CACGGACTGT GGCTGCACGC CACGTCCTGG 
GAGCCCTGGA TCGACCTGTT CCAGAAGGAG GGTTACGACG CCTCCGCACC GGGCTGGCCC
GGCGACCCCG ACACCGTCGA GGAAGCCCGC GCCAACCCCG AGAGCATCGC CGACCACGGC
ATCGACGCCG TGGTCGACCA CTATGCCTCG ATCATCAAGG ACCTGCCGGT CGCGCCGATC
CTGATCGGGC ACTCCTTCGG CGGCATGATC GCCCAGAAGC TTCTGGGCCA GAACCTGGCC
GCGGCCGCCG TCGCGATCGA CGCCGCGCAG ATCAAGGGCG TCCTGCCCCT GCCGCTGTCG
GCGCTGCGCG CCACGCTGCC GGTGTTCAAG AACCCGGCGA ACAAGCACCG CGCGGTGTCG
CTGACCGCCG AGCAGTTCCG CTACGCGTTC GGCAACGCGC TGAGCGCGGA GGAGTCGGAC
GCACTGTACG AGCGCTGGAC GATCCCCGCG CCAGGCAAGC CGTTGTTCGA AGCCGCCGCG
GCCAACTTCA ACCCGCACTC GCCGGCCAAG GTCGACACCG CCAACGAGCT GCGCGGTCCG
CTGCTGCTGA TGACCGGCGG CAAGGACCAC ACCGTCCCGG AGGCGGTGAC CCGCGCGACG
CTCAAGCAGT ACCGGCACTC CGAGGCGGTC ACCGACATCC TCGACTTCCC CGACCGCGGA
CACTCGCTGA CCATCGACGG CCGGTGGCGC GAGGTCGCCG ACACCGCCCT GGACTGGCTG
CGCCGGCAGG AGCTGTGA
 
Protein sequence
MTTPTPVVFI HGLWLHATSW EPWIDLFQKE GYDASAPGWP GDPDTVEEAR ANPESIADHG 
IDAVVDHYAS IIKDLPVAPI LIGHSFGGMI AQKLLGQNLA AAAVAIDAAQ IKGVLPLPLS
ALRATLPVFK NPANKHRAVS LTAEQFRYAF GNALSAEESD ALYERWTIPA PGKPLFEAAA
ANFNPHSPAK VDTANELRGP LLLMTGGKDH TVPEAVTRAT LKQYRHSEAV TDILDFPDRG
HSLTIDGRWR EVADTALDWL RRQEL