Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3623 |
Symbol | |
ID | 8334976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4050984 |
End bp | 4051781 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644956764 |
Product | hypothetical protein |
Protein accession | YP_003114367 |
Protein GI | 256392803 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.337914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACAC CGACCCCCGT CGTTTTCATC CACGGACTGT GGCTGCACGC CACGTCCTGG GAGCCCTGGA TCGACCTGTT CCAGAAGGAG GGTTACGACG CCTCCGCACC GGGCTGGCCC GGCGACCCCG ACACCGTCGA GGAAGCCCGC GCCAACCCCG AGAGCATCGC CGACCACGGC ATCGACGCCG TGGTCGACCA CTATGCCTCG ATCATCAAGG ACCTGCCGGT CGCGCCGATC CTGATCGGGC ACTCCTTCGG CGGCATGATC GCCCAGAAGC TTCTGGGCCA GAACCTGGCC GCGGCCGCCG TCGCGATCGA CGCCGCGCAG ATCAAGGGCG TCCTGCCCCT GCCGCTGTCG GCGCTGCGCG CCACGCTGCC GGTGTTCAAG AACCCGGCGA ACAAGCACCG CGCGGTGTCG CTGACCGCCG AGCAGTTCCG CTACGCGTTC GGCAACGCGC TGAGCGCGGA GGAGTCGGAC GCACTGTACG AGCGCTGGAC GATCCCCGCG CCAGGCAAGC CGTTGTTCGA AGCCGCCGCG GCCAACTTCA ACCCGCACTC GCCGGCCAAG GTCGACACCG CCAACGAGCT GCGCGGTCCG CTGCTGCTGA TGACCGGCGG CAAGGACCAC ACCGTCCCGG AGGCGGTGAC CCGCGCGACG CTCAAGCAGT ACCGGCACTC CGAGGCGGTC ACCGACATCC TCGACTTCCC CGACCGCGGA CACTCGCTGA CCATCGACGG CCGGTGGCGC GAGGTCGCCG ACACCGCCCT GGACTGGCTG CGCCGGCAGG AGCTGTGA
|
Protein sequence | MTTPTPVVFI HGLWLHATSW EPWIDLFQKE GYDASAPGWP GDPDTVEEAR ANPESIADHG IDAVVDHYAS IIKDLPVAPI LIGHSFGGMI AQKLLGQNLA AAAVAIDAAQ IKGVLPLPLS ALRATLPVFK NPANKHRAVS LTAEQFRYAF GNALSAEESD ALYERWTIPA PGKPLFEAAA ANFNPHSPAK VDTANELRGP LLLMTGGKDH TVPEAVTRAT LKQYRHSEAV TDILDFPDRG HSLTIDGRWR EVADTALDWL RRQEL
|
| |