Gene Caci_3619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3619 
Symbol 
ID8334972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4047614 
End bp4048474 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content72% 
IMG OID644956760 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003114363 
Protein GI256392799 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.938744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCTC ATCTGCCCCG CCTGCGCCAG AAGCGCTTGG CGATACCCGC CGTCCTGGCC 
GCCGCCGCGC TCGTCGTGCC CGCCGTCGCG ACCGCCTCGG CCGCGCCGGC TCCGCTCTCG
GCGACGGCGT CCGGCTCGGC GCGGCACGCG CCGAAGCCGA CCGTCGTGCT GGTCCACGGC
GCCTTCGCCG ACTCCTCCAG CTGGAACGGC GTCATCACCC GCCTGGAACA CGACGGCTAT
CCGGTCATCG CCGCCGCCAA CCCGCTGCGC AGCCTGGACG GCGACGCGGC CTACGTCTCC
AGCATCCTGA GCACCATCCC CGGACCGGTC ATCCTGGTCG GCCACTCCTA TGGCGGCGAG
GTCATCACCA ACGCCGCCGT CGGACACACG AATGTCAAGG CCCTGGTATA CATCGCGGCC
TTCGCTCCGG ACCAGGGCGA GAGCGCCTTG CAGCTGACCG GGATGAACCC CGGTAGCCAG
CTCGGTGCGG CGCTGGTCGT GCGGCCGTAC GCCGCCGGCG CGGACAGCGG CAAGGACGGG
TACGTCGACC AGACGAAGTT CCACGCCGTG TTCGCCGCGG ACGTTCCGGC GTCCACCGCC
GACCTGATGG CGGCCGAACA GCGGCCGGTG TCGCTGGCCG CGCTCCAGGA CCCCAGCGGC
GTCCCGGCGT GGAAGACCAT CCCGAGCTGG TACCTGGTCG CCGGCGCCGA CCAGGCGATC
CCGGCCGCCA CCGAGAAGTT CATGGCGCAG CGCGCCGGTG CTCACACAGT CGTCGTCCCG
GGCGCCTCGC ACGCGGTTAT GGTCTCTCAC CCCGACCAAG CCGAGAGCCT GATCGTCAAG
GCCGCCAAGG CCACCGGCTG A
 
Protein sequence
MTSHLPRLRQ KRLAIPAVLA AAALVVPAVA TASAAPAPLS ATASGSARHA PKPTVVLVHG 
AFADSSSWNG VITRLEHDGY PVIAAANPLR SLDGDAAYVS SILSTIPGPV ILVGHSYGGE
VITNAAVGHT NVKALVYIAA FAPDQGESAL QLTGMNPGSQ LGAALVVRPY AAGADSGKDG
YVDQTKFHAV FAADVPASTA DLMAAEQRPV SLAALQDPSG VPAWKTIPSW YLVAGADQAI
PAATEKFMAQ RAGAHTVVVP GASHAVMVSH PDQAESLIVK AAKATG