| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3613 |
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| Symbol | |
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| ID | 8334966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4039491 |
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| End bp | 4042145 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644956754 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003114357 |
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| Protein GI | 256392793 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00449283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCCGG GTTCGGACGA CACCTTCACG GGCCGGGACG CAGAGCTCGG CATCCTCGCC
GCCGTCCTCG CCCCCGGCGG CCACGGCGCC GTCCTCACAG GTGGCGCCGG CGTCGGCAAA
ACCCGCCTCG CCGCGCAGGC CGCCCGGCAA GCCCAAAGCG ACACTCCCGG CACCGTCATC
CGCCGCGTCC GAGCCACCGC CAGCTCCCGC GCCCTCCCCC TCGGCGCCTT CGCACCCTTG
CTCACCGAGG CCGTCGGCAT GGCTGCCGAC TTCAGCATCC TCATCAAGGC CGCCGAACTC
GTTCTGCCCG CCGACCAACC CCACTCCATC CTCATCGTCG ACGACGCCCA CCTGCTCGAC
CCGCTGTCCG CCAGCCTCCT CCTGCACCTC GTCCTGGCTC GCGACGCACA CATACTCGTC
ACCGTCCGCA GCGGCGAACC CTGCCCCGAT GCCGTCACAG CGCTCTGGAA AGACCACCTG
CCCCGCCTCG ACATCGGCCA CCTGAACGAG AACGACACCA CCGCCCTCGT CGAACGCCTC
CTGGGCGGCC CTCTCCAAAG CCTGACTCGA CGCCGCTTTT GGCGCCTCAC CGCCGGCAAC
CCCCTTTACA TCCACACCGC CGTCGACGCC GCCGTCGCCT CCGGCGCCCT GGCCCCGGTG
GCCGGCCTGT GGCGCTGGCG CGGCGGCATC GCCGCCACGC CCCGACTCAC CGAACTCATC
ACCGAACGTC TCGACGCCCT CGAGCCGGCC GTCTACGCCG CCGTCGAGAC CGTCGCCTAC
GGCGAACCTC TCGGCCTGGA CCTCCTACGC CGCCTCACCG GCGCCGCCGC CGAAACCGCC
GAACGCGCCC GACTCATCAC CCTCATCCCC GACGGCCGGC GCCTCGAAGC CCACCTCGCC
CACCCCCTCT ACGGCGAAGC CATCCGCGCC CGCACCCCCA AAAGCACCGA ACGCCGCATC
CACCGCCACC TCGCCGAAGC CCTCGCCGCC ACCGGCGGCC GCCGCTCCGG CGACACCCTG
CGCCGCGCCC GACACACCCT CGACAGCGCC GAACCCGCCG ACCCCGCCCT GCTCACCCAG
GCCGCCGCCC AAGCCATCGG CTTCTACGAA CTCGACCTCG CCGTCCGCTG CGCCCATCAC
GCCGTCCAAG CCGGCGGCCC CGTCGAAGCC AGCCTCCTGC TCGGCATGGC CCTCAGCTGG
CTCGACCGCG GCACCGCATC CGAAACCGCC CTGGCCGCCG ACGTCCACCG CGCCGTCACC
GAAGACCAGA TCACCGCGAT GGCCTTCACC CGCGCCGCCA ACCTCAACTG GGTCGCCGTC
CAACCCGACG ACGCCGACCG CGTCCTGGAA GAAGGCCGCC AGAAACTCCA CACCCCCCAG
GCGCGGGCAG TCCTCGACGC CTTCGGCTCC GCCTTCACCG CCCACCGCGG CCACGCCGAC
AAAGCACTGG CCATGGCCGA CGCCGTCCTC GCCGTCCCCG ACCGCCCCTC CACCGCCACC
GTGTTCGCCA CCCTCGGCGG CACCGAAGCC CTGGCCGTCA TGGGCCGTGC CGACGAAGTC
CCGGCCCGCG TCACCGCCGG CCACGCAGCC ATCGACCAGG TCCCCCAGTT CGGCATCATG
CGCCACGCCC TGGCCGCGGG CCACCTCAAT GCCCTGCTAC TCGCCGGCCG CCTCGACGAC
GCCGACCAAG CCGTCACCTT CTACGCCGGC TACACCGACG TCGCCCTCGC CCTGTCCGGC
TCCCTGCTCA TGTACGGCTA CCACGCCACC AACTACTTCC GCGGCGCCAC CGCCTTGGAA
CGCGGACAGA TCAGCACCGC CATCGGCATC ATCCGCGACA CCTTCGCCGG ATTCAGCGAG
GAGGACCCCG GCAGCTGGGC CGCCATGGCA GCCCTCACCC TCGCCCAAGC CCACGGCGCC
GCGGGCGACC CGACAGCGAC CGCGGCAGCC ATCGCCGACC TCAACCGCCA CTATCGACCC
ACCACCCAAG GCCTGATCCA GCCCGTCGTC CACCTCAGCT CCGCCTGGCT CGCCGCCGCC
GAAGGCGCCG TCGGCAAGGC CCGGACCACG GCGCGCGAGG CCGCTGACTG CGCGGCACGA
CTGGGACATC TCGCGGTCGA GACCGTGGCA CTCCACACGG CCGTGCGGTT CGGCGACCGG
ACGTGCGGAC CACGGCTGCA GGCCCTGACG AGCCTTGTCG ACGGGCCGCG GGTCCAGCTC
GCAGCCCAGC ACGCACAGGC CTGGAGCGAG CGAGACGCCT CGAAGCTGTT GACAGTCTGC
ACGGCACTGG CCGACGCCGG CCTGCCGCTG ATCGCCGCCG AAGCCGCGGC ACAGGCCGCG
ATCGTGCGCC GCGAGGCTGG CGACCTGCGT ACCGAACAGA CCGCGTCGGC CCAGGCCCGA
CGCCTGCTGG CGGTATGCCA GGGCGCTGAC ACCCCGGCGC TGCGCGAAGC CCTGCGACCC
TCGCCCCTGA CCGAACGCGA ACGGGAAGTC GCCGCCCTGG TCGCCGCCGG CCACAGCAAC
CGCCAGATCG CCGAACACCT CGTGGTGTCC GTGCGGACGG TGGAAGGGCA CGTCTACCGC
GCCTGCGTGA AACTCGGCGT CGCCGACCGC GCCGCCCTGG CCGAACTCAC CGTGACTCCC
GCACAAGACA GGTAG
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| Protein sequence | MWPGSDDTFT GRDAELGILA AVLAPGGHGA VLTGGAGVGK TRLAAQAARQ AQSDTPGTVI
RRVRATASSR ALPLGAFAPL LTEAVGMAAD FSILIKAAEL VLPADQPHSI LIVDDAHLLD
PLSASLLLHL VLARDAHILV TVRSGEPCPD AVTALWKDHL PRLDIGHLNE NDTTALVERL
LGGPLQSLTR RRFWRLTAGN PLYIHTAVDA AVASGALAPV AGLWRWRGGI AATPRLTELI
TERLDALEPA VYAAVETVAY GEPLGLDLLR RLTGAAAETA ERARLITLIP DGRRLEAHLA
HPLYGEAIRA RTPKSTERRI HRHLAEALAA TGGRRSGDTL RRARHTLDSA EPADPALLTQ
AAAQAIGFYE LDLAVRCAHH AVQAGGPVEA SLLLGMALSW LDRGTASETA LAADVHRAVT
EDQITAMAFT RAANLNWVAV QPDDADRVLE EGRQKLHTPQ ARAVLDAFGS AFTAHRGHAD
KALAMADAVL AVPDRPSTAT VFATLGGTEA LAVMGRADEV PARVTAGHAA IDQVPQFGIM
RHALAAGHLN ALLLAGRLDD ADQAVTFYAG YTDVALALSG SLLMYGYHAT NYFRGATALE
RGQISTAIGI IRDTFAGFSE EDPGSWAAMA ALTLAQAHGA AGDPTATAAA IADLNRHYRP
TTQGLIQPVV HLSSAWLAAA EGAVGKARTT AREAADCAAR LGHLAVETVA LHTAVRFGDR
TCGPRLQALT SLVDGPRVQL AAQHAQAWSE RDASKLLTVC TALADAGLPL IAAEAAAQAA
IVRREAGDLR TEQTASAQAR RLLAVCQGAD TPALREALRP SPLTEREREV AALVAAGHSN
RQIAEHLVVS VRTVEGHVYR ACVKLGVADR AALAELTVTP AQDR
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