Gene Caci_3603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3603 
Symbol 
ID8334956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4023610 
End bp4024992 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content68% 
IMG OID644956745 
Productcellulose-binding family II 
Protein accessionYP_003114348 
Protein GI256392784 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.131796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTC TACTCAGAGC ACGTGCCCTT GCGGCCGCCC TCGCGATCGC TTTCACGGGG 
GCGCTCTCCG CGATCGCCCT GCCGGCTGCG CAGGCCGCCA CGACCACGTG CTCCGGTACC
GGCACGATCC CGGCCGGGGA CTACACGATC CAGGCCAACG AGTGGAACTC CAGCGCACAG
CAGTGCCTGA CCTACAACGG CGCGACCGCG TGGACGGTGA GCACTGCGAA CTTCAACCTC
GGCGGCAGCG GCGCGCCGGC CACCTATCCG TCGATCTTCA AGGGCTGTCA CTGGGGTCTG
TGCACCAGCA ACAACCCCTT CCCGATCCAG ATGAGCAAGC TGGGCAGCGC TGTCAGTTCC
TGGGACACCA CGCAGCCGTC GTCGGGTGCT TATGACGTCG CCTACGACAT CTGGTTCAAC
TCCTCGCCCA CCGCCACCGG CCAGCCGGAC GGCACCGAGG TGATGATCTG GATGAACAGC
CGCGGCGGGG TGCAGCCGTT CGGCTCGCAG ACCGGCAACA CCACGGTCGC CGGCCACAAC
TGGAACGTGT GGACCGGGCA GCAGTCCTCG TGGAAGATCA TCTCCTACGT CCTGAACCCC
GGCGCCACCT CGCTGTCCAA CCTCGACCTC AAGGCGATGT TCCAGGACGC CGTGTCCCGC
GGCTCCATCA ACCCCTCGAA CTACCTGCTC GACGTCGAAG CCGGCTTCGA GATCTGGCAG
GGCGGACAGG GCCTGGGCAC CAACAGCTTC TCGGTCTCGG CCACCGCTGC CGGGTCCGGC
GGCGGCGACA CCACGGCGCC GTCCGTTCCG GCGAACCTCG CGGTCACCGG GACGACCGCG
TCCTCGGCCT CGCTGTCGTG GTCGCCGTCC ACGGACAACG TCGGCGTCAC CGGATACCGC
GTGTACCGCA ACGGCGCCCA GGTCGGCACG TCCAGCGGGA CCACGTTCAC CGACACCGGT
CTGAGCGCCG CGACGCACTA CACGTACACC GTCGCCGCCG TCGACGCGGC CGGCAACGTC
TCGGCGCCGT CGACCGGCGC GACCGCGACG ACGACCTCGA ACGGGGGAGG AGGAGGTGGC
AGCGGATGCA CAGCGGCCTA CTCGGTGACC AACCAGTGGA ACTCGGGCTT CACCGCCAAC
GTGACCGTGA CGAACTCCGG GACGGCGCCC ATCAACGGCT GGAAGGTGAA CTGGACCTGG
GGCGGCGGCC AGCAGATCAC CAGCCTGTGG AACGGCACGC TGAGCAGCAG CGGATCGGCG
GTGACCGTCA CGAACATGGG CTACAACGGC TCGGTGGCGC CGGGAGCGAA CACATCGTTC
GGCTTCCAGG GCGCCTATTC GGGTACTAAC GGGACCCCGA CGCTGACCTG TACGGCGAGC
TGA
 
Protein sequence
MARLLRARAL AAALAIAFTG ALSAIALPAA QAATTTCSGT GTIPAGDYTI QANEWNSSAQ 
QCLTYNGATA WTVSTANFNL GGSGAPATYP SIFKGCHWGL CTSNNPFPIQ MSKLGSAVSS
WDTTQPSSGA YDVAYDIWFN SSPTATGQPD GTEVMIWMNS RGGVQPFGSQ TGNTTVAGHN
WNVWTGQQSS WKIISYVLNP GATSLSNLDL KAMFQDAVSR GSINPSNYLL DVEAGFEIWQ
GGQGLGTNSF SVSATAAGSG GGDTTAPSVP ANLAVTGTTA SSASLSWSPS TDNVGVTGYR
VYRNGAQVGT SSGTTFTDTG LSAATHYTYT VAAVDAAGNV SAPSTGATAT TTSNGGGGGG
SGCTAAYSVT NQWNSGFTAN VTVTNSGTAP INGWKVNWTW GGGQQITSLW NGTLSSSGSA
VTVTNMGYNG SVAPGANTSF GFQGAYSGTN GTPTLTCTAS