Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3602 |
Symbol | |
ID | 8334955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4021849 |
End bp | 4023153 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644956744 |
Product | glycoside hydrolase family 6 |
Protein accession | YP_003114347 |
Protein GI | 256392783 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0359346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTCCA GAACCGCGAG ACTCCTGCTC GCCGCAGGTC TTTCCGCATC GGCCATCGCC TTGGGTCCGG TCGCCACGGC GGCCACCGCG ACCACGGCGC ACGCCCCGAG CGCCGGGCAC ACGCTGCCGG CCGACACGCG CTTCGCCGTC ACGCCCGACA ACGAGGCCCA GCGCCAAGCA CTGACCGATC TGCAGCACCA CGACCTCGCC GGCGCCGCGG CCATGGCGAA GCTGGCCAGC TGGCCCGAGG CGACCTGGTT CACCAGCGGC ACGCCGGCTC AGGTGCGCGA CCAGGTCCGC GCGACCGTGC GGACCGCCGC GGCCGAGCGT GCCGTTCCGG TGCTGGTCGC CTACGACATC CCGCTGCGGG ACTGCAGTCA GTACTCCGCC GGCGGCGCGG CGTCCGATGC CGCCTACCAG CAGTGGATAT CAGCGTTCGC ACAAGGGGTC GGCTCGAGCC GGGCCGTGGT GATCGTCGAG CCGGACGCGC TGGCGAACCT GCCCTCGGAT TGCAATGCCA CCACCGACCC GACCGGGACG CTGACCGCCG GGCGCATCGC CGACATCAAG TACGCGGTGT CCGCCCTCGA AGCCCAGCCG CAGACGGTCG TCTACCTCGA CGCCGGAAAC AGCCAGTGGC ACTCTGTCGG CGATATGGCG CAGCGCCTGA TCCAGGCAGG CGTCGCTCAG TCCCAGGGCT TCTTCCTCAA CGTGTCCAAC TACCAGCCGA CCGACCAGAC CGACCAGTAC GGCACCTGGA TCTCCAAGTG CCTGTGGTTC GCCACCGACG GTCCGGCATG GGCAGCCGGA CACACCGACT ACTGCGCCAG CCAGTACTAC TCCTCGGCGG CGCCGAACGA CGGAGCGCCC GGCGACGCGG TGTCCCCGAC CGATGCGAGC ACCTGGCACT GGACGGACGC CTGGTTCGAC CAGAACGTCG GCACTCCCCC GCCCGCGCAG CTGACCCACT TCGTCGTGGA CACCAGCCGC AACGGTAAGG GCGCATGGAC CCCGGCGCCC GGCAAGTACA CCGGCGACCC CCAGACCTGG TGCAACCCTC CGGGTCGCGG CATCGGCGCC ACGCCGACCG CCGCCACCGG CGTCCCGCTC GTCGACGCCG ACCTGTTCAT CAAGACGATC GGCGAGTCCG ACGGCAGCTG CACGCGCAGC ACCGCGGGTC CCGGCGACCC CGAATACGGC GGCACGGTGG ACCCGGCGGC CGGCGCGTGG TGGCCGGCCC AGGCACTCGG CCTCGTCCAG GACGCCGTCC CGACGCTGAC CTTCAATCCG CGTCTGCTTC CCTGA
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Protein sequence | MLSRTARLLL AAGLSASAIA LGPVATAATA TTAHAPSAGH TLPADTRFAV TPDNEAQRQA LTDLQHHDLA GAAAMAKLAS WPEATWFTSG TPAQVRDQVR ATVRTAAAER AVPVLVAYDI PLRDCSQYSA GGAASDAAYQ QWISAFAQGV GSSRAVVIVE PDALANLPSD CNATTDPTGT LTAGRIADIK YAVSALEAQP QTVVYLDAGN SQWHSVGDMA QRLIQAGVAQ SQGFFLNVSN YQPTDQTDQY GTWISKCLWF ATDGPAWAAG HTDYCASQYY SSAAPNDGAP GDAVSPTDAS TWHWTDAWFD QNVGTPPPAQ LTHFVVDTSR NGKGAWTPAP GKYTGDPQTW CNPPGRGIGA TPTAATGVPL VDADLFIKTI GESDGSCTRS TAGPGDPEYG GTVDPAAGAW WPAQALGLVQ DAVPTLTFNP RLLP
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