Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3591 |
Symbol | |
ID | 8334944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4006511 |
End bp | 4008067 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644956734 |
Product | esterase, PHB depolymerase family |
Protein accession | YP_003114337 |
Protein GI | 256392773 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.229813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGAT CCCGTTCTGT GAAAACCCGC CTGCTCGGTC TGTTCGCGGC AGTGGCGGCT GCTGTCGCTG TGAGTTTGCC TGCCGCGCCG CAGGCTGCTG CCGCGTCGTT GACGCAGGTG ACGAACTTCG GGACCAACCC GAGCAACCTG GCGATGTATG TGTATGTGCC GAACAACGTC AAGCCCAACC CGTCGATCCT GTTGGCGATG CACGGCTGTC AGGGCACTGC GTCGTACATG TACTCCAGTA CTGATTTCGG GAAGCTGGCC GATCAGTACG GGTTCATCGT CATCTACCCG CAGACCAACC CCAGCGGCAG TTGCTGGGAT GTGTCCTCCG ATCAGGCGCT GAAACGCAAC GGCGGCAGCG ATCCGGTGGG TCTGATGTCG ATGATCACCT ACACCGAGCA GCACTACGGC GGGAATGCCA ACTCGGTGTT CGTCACCGGG GAGTCCTCCG GCGGGATGAT GACCAACGTC ATGCTCGCCG ACTACCCGGA TGTGTTCAAG GCTGGTGCGG CGTTCATGGG CGTGCCCTAC CACTGCTTCT ACACCGGCAG CGTGCGCGGC TGGAACTCGC CCTGCGCCAA CGGCCAGGTC TCCATGACCG CCCAGCAGTG GGGCGACCTC GTGCGCAATG ACGGGGATCC CGGTTACACC GGTCCGCGTC CGCGGATGCA GTTGTGGCAT GGCACTGCCG ACACCACGTT GAACTACAAC AATCTGGGTG AGGAGATCAA GCAGTGGACG AACGTGGACG GGGTGAGTCA GACCCCGTCG TCCAGTGACA CCCCGGTCGC CAACTGGAAC CGCACCCGCT ACAACAACGC CTCCGGCACC ACCCAGGTCG AGGCGTACAG CATCGTCGGC GCCGGACACC AGCTGCCGAT CCAGGGCACA CAGATGGCCG CCTACGCCAT CCACTTCATG GGCCTGGACG GCAGCGGCAC CACCACCGGC AACACGGTCA CCGTGACCAG CCCCGGCAAC CAGAGCGCCA CCGTCGGCAC CGCGATCAGC GCCGTGCAGG TCCACGCCAC CGACTCGGCC ACCGGACAGT CCCTGACCTA CAGCGCGACC GGTCTTCCGG CGGGGCTGTC GATCTCCTCC AGCGGGCTGA TCTCCGGCAC TCCGACCGCA GCCGGCACCT CCACCTCGAC GGTGACCGCG ACCGACGGGA CCGGCGCGTC CGGCTCGGCG ACGTTCACCT GGACCGTCTC CGGCGGCGGC GGTACCACGC CGGGCACCTG CCATGTCGCC TACACCAGGA CCAACGAATG GCCAGGAGGC TTCACCGCCA ACGTCACGAT CACCAACACC GGTACGGCGG CGATCAACGG CTGGACCGTC GGCTGGAGCT TCCCCGGCGA CCAGAAGATC ACCAACGCCT GGAGCGCCAC CGCCACCCAG AGCGGCGCCG CCGTCAGTGC CGCCAACGTC GCCTACGACG CCACCATCGC CCCCGGAGCC AACACCTCGT TCGGCTTCCA GGGCACGTTC ACCGCGAACG ACACCTCACC CTCGAGCTTC ACCGTCAACG GAGCCGCGTG CTCATAG
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Protein sequence | MLRSRSVKTR LLGLFAAVAA AVAVSLPAAP QAAAASLTQV TNFGTNPSNL AMYVYVPNNV KPNPSILLAM HGCQGTASYM YSSTDFGKLA DQYGFIVIYP QTNPSGSCWD VSSDQALKRN GGSDPVGLMS MITYTEQHYG GNANSVFVTG ESSGGMMTNV MLADYPDVFK AGAAFMGVPY HCFYTGSVRG WNSPCANGQV SMTAQQWGDL VRNDGDPGYT GPRPRMQLWH GTADTTLNYN NLGEEIKQWT NVDGVSQTPS SSDTPVANWN RTRYNNASGT TQVEAYSIVG AGHQLPIQGT QMAAYAIHFM GLDGSGTTTG NTVTVTSPGN QSATVGTAIS AVQVHATDSA TGQSLTYSAT GLPAGLSISS SGLISGTPTA AGTSTSTVTA TDGTGASGSA TFTWTVSGGG GTTPGTCHVA YTRTNEWPGG FTANVTITNT GTAAINGWTV GWSFPGDQKI TNAWSATATQ SGAAVSAANV AYDATIAPGA NTSFGFQGTF TANDTSPSSF TVNGAACS
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