Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3574 |
Symbol | |
ID | 8334927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3985348 |
End bp | 3986091 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644956717 |
Product | peptidase C60 sortase A and B |
Protein accession | YP_003114320 |
Protein GI | 256392756 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.560002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTGGC TGACAAGGCT GTTCGGAAGT GGCCGCCGGC GTCTGCTGGC GTCGGCGGCC GCCGTCCTGC TGCTGGCTTC GGCGGGAGGG CTGGCGCTCG GGTTCGCGGC GCAGCACCAC CCGCCGCAGC CTCCGGCTTC GGCCGCGCTG CCGGCTGCGG GAGTGCCGAA CGCGGCGAGC GCCGGAACGA CGCCGAGCAC TTCACCAGCG CCGGCCTCGC CTTCGCCCGC CGCAACGCCC GCAGCACCCG CAACGCCGAC GAAGCCAGCC GCTCCAGCCA CTCCAACCGC CGCACCCACC GCGATCAGCA TCCCGGAGAT CGGCGTGCAC CACACCCTGA TCCAACTCGG CCAGAACTCC GACGGCACCA TCCAGACACC GCCGCTGACC GACCCCTCGA TTCCGGGCTG GTACCGCTAC TCCCCCGCGC CGGGCCAGGT GGGACCGTCA GTCATCGTCG GACACATCGA CGGCACGACC GGCGCCAAGG GCGTCTTCTA CAACCTGGGC GCGCTGCGTC CCGGTGACAC CGTCGACGTC AGCCGCAGCG ACGACACCGT GGCCGTGTTC CGGATCGACG GCATCAACAA GTACGCCAAG AGCGCCTTCC CCACCGCGAC CGTCTACGGC AACACCACCA ACCCGCAGCT GCGGCTGATC ACCTGCGCCG GACCGTTCGA GAACCAGCAC TACCTGGACG ACATCGTCGT CTACGCCAGC TTGACCGCGA TCCACCCGGC CTAG
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Protein sequence | MSWLTRLFGS GRRRLLASAA AVLLLASAGG LALGFAAQHH PPQPPASAAL PAAGVPNAAS AGTTPSTSPA PASPSPAATP AAPATPTKPA APATPTAAPT AISIPEIGVH HTLIQLGQNS DGTIQTPPLT DPSIPGWYRY SPAPGQVGPS VIVGHIDGTT GAKGVFYNLG ALRPGDTVDV SRSDDTVAVF RIDGINKYAK SAFPTATVYG NTTNPQLRLI TCAGPFENQH YLDDIVVYAS LTAIHPA
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