Gene Caci_3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3560 
Symbol 
ID8334913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3974011 
End bp3974532 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content74% 
IMG OID644956703 
Productprotein of unknown function DUF1486 
Protein accessionYP_003114306 
Protein GI256392742 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA CCGCTAACAA GGCCCTGGTC GAGAAGGCCA TCGGCATCCT GTCGGGCCAG 
ACCCCCGAGG ACTTCGCGCA GGAGGCGTTC GCCGCCGACT ACCGCGACCA CAACGCGCCC
GGCGACGGCG GCCCGGCGCG GTTCCTGAAG GTCCGCGCCC AGTTGCAGAC CGCCTTCTCG
GACCTGAAGC ACGAGATCCT CGCGAGCGTC GCCGAGGACG ACATCGTCTC GATCCACGTG
CAGCTGACCG GCACGCACAC CGGCGTGTTC CAGGCCGGTC CGCGCGCGAT CCCGGCGACC
GGCAACGCGG TCGTGATCCG CTCGATGCAC ATGCTGCGGG TCGCCGACGG CCGCATCACC
GACAACTGGG CCGTCCGGGA CGACCTGACC GTGCTGCGCG CGGTCGGCGC CTTGCCGACG
CCGCCGGCCG GCGGTCCGGG CGGTCCCGGC GGTCCGGGCG GAGCCGGCGG TCCCGCAGGT
CCCGGCGGAC CCGGTCGCCC CGGCGCCCCG GCGGCTGCCT GA
 
Protein sequence
MSTTANKALV EKAIGILSGQ TPEDFAQEAF AADYRDHNAP GDGGPARFLK VRAQLQTAFS 
DLKHEILASV AEDDIVSIHV QLTGTHTGVF QAGPRAIPAT GNAVVIRSMH MLRVADGRIT
DNWAVRDDLT VLRAVGALPT PPAGGPGGPG GPGGAGGPAG PGGPGRPGAP AAA