Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3560 |
Symbol | |
ID | 8334913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3974011 |
End bp | 3974532 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644956703 |
Product | protein of unknown function DUF1486 |
Protein accession | YP_003114306 |
Protein GI | 256392742 |
COG category | [R] General function prediction only |
COG ID | [COG5485] Predicted ester cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACCA CCGCTAACAA GGCCCTGGTC GAGAAGGCCA TCGGCATCCT GTCGGGCCAG ACCCCCGAGG ACTTCGCGCA GGAGGCGTTC GCCGCCGACT ACCGCGACCA CAACGCGCCC GGCGACGGCG GCCCGGCGCG GTTCCTGAAG GTCCGCGCCC AGTTGCAGAC CGCCTTCTCG GACCTGAAGC ACGAGATCCT CGCGAGCGTC GCCGAGGACG ACATCGTCTC GATCCACGTG CAGCTGACCG GCACGCACAC CGGCGTGTTC CAGGCCGGTC CGCGCGCGAT CCCGGCGACC GGCAACGCGG TCGTGATCCG CTCGATGCAC ATGCTGCGGG TCGCCGACGG CCGCATCACC GACAACTGGG CCGTCCGGGA CGACCTGACC GTGCTGCGCG CGGTCGGCGC CTTGCCGACG CCGCCGGCCG GCGGTCCGGG CGGTCCCGGC GGTCCGGGCG GAGCCGGCGG TCCCGCAGGT CCCGGCGGAC CCGGTCGCCC CGGCGCCCCG GCGGCTGCCT GA
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Protein sequence | MSTTANKALV EKAIGILSGQ TPEDFAQEAF AADYRDHNAP GDGGPARFLK VRAQLQTAFS DLKHEILASV AEDDIVSIHV QLTGTHTGVF QAGPRAIPAT GNAVVIRSMH MLRVADGRIT DNWAVRDDLT VLRAVGALPT PPAGGPGGPG GPGGAGGPAG PGGPGRPGAP AAA
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