Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3552 |
Symbol | |
ID | 8334905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3965884 |
End bp | 3967575 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644956695 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_003114298 |
Protein GI | 256392734 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACCA TTGTCACAGC GACCGGCAAG GCGCCTGGTG AAGGCAAGGT CCAGCACTGC GACGTCTTCA TCCTGGGCTC CGGCCTGGCC GGCTCCACCG CCGCGGCGAT TCTGCAGCAC AACGGCTGCA ACGTCGTGCT CGTCGACGCT TCGGCGCACC CGCGCTTCGC GGTCGGTGAG TCGATGATCC CGCAGCTGGT GGAGTGGCTG CACATTCTGG CCGAGCGGTT CGACGTGCCG GAGATCAAGA ATCTGGCCAG TATCGGCGCC AGCACGAAGA ACATCGGGCC GTCCTTCGGC AGCAAGGGCC ACTTCGGCTT CATGCGGCAC GAGCCGGGCA AGGAGCCGAA CCCCAAGGAG GCCACGCAGC TGGCCATCCC GAAGGTGCTG ACTCAGGCCA GCCACCTGTT CCGGCAGGAC AGCGACTCCT ACATGTTCAA CGTCGCGGCC AAGTACGGCG TCACCACGCG GCAGTACTGG CGCGCGGCGG ATCTGGACTT CGACGACGAC GGCGTGACCG TCACCGGCCA GAACGGCGAG GTCTTCCGCG CCAAGTACCT CATCGACGCC TCCGGCTTCC GCTCGCCGCT GGCCGAGAAG TACGGCCTGC GCGAGCAGCC GGCCCGGTTC AAGCACCACT CGCGCTCGAT GTTCAGCCAC TACATCGGCA TCAAGCCGTT CGACGACGTG GTCGACCACC CGGCGAGCGT GCGTCCGCCG ATGCGCTGGC ACAACGGCAC GATGCACCAC CTCATAGACC GGGGCTGGTT CTGGATCATC CCCTTCGACA GCTACAAGGA CTCGACGAAC CCGCTGTGCT CGGTCGGTCT CACCATCGAC GAGCGCACGT ACCCGAAGAA CAAGGACATG ACCGCCGAGG AGGAGTTCAA CTTCTTCCTC GACCAGTATC CGGCGGTGAA GCGGCAGTTC GAGGGCGCCC ACAAGGTGCG CGAGTGGGTC TCGACCGACC GGCTGCAGTA CTCCTCGTCG CGCTCGATCG GCGACCGCTG GTGTCTGATG TCGCACGCGG CGGGCTTCAT CGATCCGCTG TTCTCCCGCG GCCTGTCCAA CACCTTCGAG GTCATCAACT CCCTGGCGTA CCGGATCCTG CAGGGCATGA AGGACGGCGA CTTCTCCGCC GAGCGCTTCG AGTACGTCGA GAAGCTGGAG CGCGGGCTGC TGCAGTACAA CGACGACCTG GTGAACAGCT CATTCATCTC CTTCAGCGAC TTCGACCTGT GGAACTCGGT GTTCCGCGTC TGGGGCGCGT TCATCACCCC CGGCGTCATG CGCCTGACCC GCGCCCGGAT GCTGTTCCTG AAGACCGGCG AGGACAAGTA CTTCCAGGAG CTGGAGGACG CCGAGCACAC CGGTCTGTGG TGGCCGGAGA GCACCACGGT GAAGAACATG CTCGAGCGCA CCGCGGAGAT CTGCGAGAAG CACGAGGTCG GCGAGCTGAC CTCGAAGGAG GCCGCGAACC AGATCATGAC GATGGTCCAG GACTGCGACC TGATCAACCC CACCTTCGGC TGGAAGGACC CCGAGCACAC CTTCGTGCAC CCGACCACCT TCACCATGGC GAAGTTCATG TACTGGGCCT CGGTGAAGAG CCCGGGCGAA ATGCACGACC TGGGCCGCGA GTTCCTGAAG GGAATCCTCA AGGCCGGACG CAAGGTTCGC AAACTGCTCT AA
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Protein sequence | MSTIVTATGK APGEGKVQHC DVFILGSGLA GSTAAAILQH NGCNVVLVDA SAHPRFAVGE SMIPQLVEWL HILAERFDVP EIKNLASIGA STKNIGPSFG SKGHFGFMRH EPGKEPNPKE ATQLAIPKVL TQASHLFRQD SDSYMFNVAA KYGVTTRQYW RAADLDFDDD GVTVTGQNGE VFRAKYLIDA SGFRSPLAEK YGLREQPARF KHHSRSMFSH YIGIKPFDDV VDHPASVRPP MRWHNGTMHH LIDRGWFWII PFDSYKDSTN PLCSVGLTID ERTYPKNKDM TAEEEFNFFL DQYPAVKRQF EGAHKVREWV STDRLQYSSS RSIGDRWCLM SHAAGFIDPL FSRGLSNTFE VINSLAYRIL QGMKDGDFSA ERFEYVEKLE RGLLQYNDDL VNSSFISFSD FDLWNSVFRV WGAFITPGVM RLTRARMLFL KTGEDKYFQE LEDAEHTGLW WPESTTVKNM LERTAEICEK HEVGELTSKE AANQIMTMVQ DCDLINPTFG WKDPEHTFVH PTTFTMAKFM YWASVKSPGE MHDLGREFLK GILKAGRKVR KLL
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