Gene Caci_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3552 
Symbol 
ID8334905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3965884 
End bp3967575 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content65% 
IMG OID644956695 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003114298 
Protein GI256392734 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA TTGTCACAGC GACCGGCAAG GCGCCTGGTG AAGGCAAGGT CCAGCACTGC 
GACGTCTTCA TCCTGGGCTC CGGCCTGGCC GGCTCCACCG CCGCGGCGAT TCTGCAGCAC
AACGGCTGCA ACGTCGTGCT CGTCGACGCT TCGGCGCACC CGCGCTTCGC GGTCGGTGAG
TCGATGATCC CGCAGCTGGT GGAGTGGCTG CACATTCTGG CCGAGCGGTT CGACGTGCCG
GAGATCAAGA ATCTGGCCAG TATCGGCGCC AGCACGAAGA ACATCGGGCC GTCCTTCGGC
AGCAAGGGCC ACTTCGGCTT CATGCGGCAC GAGCCGGGCA AGGAGCCGAA CCCCAAGGAG
GCCACGCAGC TGGCCATCCC GAAGGTGCTG ACTCAGGCCA GCCACCTGTT CCGGCAGGAC
AGCGACTCCT ACATGTTCAA CGTCGCGGCC AAGTACGGCG TCACCACGCG GCAGTACTGG
CGCGCGGCGG ATCTGGACTT CGACGACGAC GGCGTGACCG TCACCGGCCA GAACGGCGAG
GTCTTCCGCG CCAAGTACCT CATCGACGCC TCCGGCTTCC GCTCGCCGCT GGCCGAGAAG
TACGGCCTGC GCGAGCAGCC GGCCCGGTTC AAGCACCACT CGCGCTCGAT GTTCAGCCAC
TACATCGGCA TCAAGCCGTT CGACGACGTG GTCGACCACC CGGCGAGCGT GCGTCCGCCG
ATGCGCTGGC ACAACGGCAC GATGCACCAC CTCATAGACC GGGGCTGGTT CTGGATCATC
CCCTTCGACA GCTACAAGGA CTCGACGAAC CCGCTGTGCT CGGTCGGTCT CACCATCGAC
GAGCGCACGT ACCCGAAGAA CAAGGACATG ACCGCCGAGG AGGAGTTCAA CTTCTTCCTC
GACCAGTATC CGGCGGTGAA GCGGCAGTTC GAGGGCGCCC ACAAGGTGCG CGAGTGGGTC
TCGACCGACC GGCTGCAGTA CTCCTCGTCG CGCTCGATCG GCGACCGCTG GTGTCTGATG
TCGCACGCGG CGGGCTTCAT CGATCCGCTG TTCTCCCGCG GCCTGTCCAA CACCTTCGAG
GTCATCAACT CCCTGGCGTA CCGGATCCTG CAGGGCATGA AGGACGGCGA CTTCTCCGCC
GAGCGCTTCG AGTACGTCGA GAAGCTGGAG CGCGGGCTGC TGCAGTACAA CGACGACCTG
GTGAACAGCT CATTCATCTC CTTCAGCGAC TTCGACCTGT GGAACTCGGT GTTCCGCGTC
TGGGGCGCGT TCATCACCCC CGGCGTCATG CGCCTGACCC GCGCCCGGAT GCTGTTCCTG
AAGACCGGCG AGGACAAGTA CTTCCAGGAG CTGGAGGACG CCGAGCACAC CGGTCTGTGG
TGGCCGGAGA GCACCACGGT GAAGAACATG CTCGAGCGCA CCGCGGAGAT CTGCGAGAAG
CACGAGGTCG GCGAGCTGAC CTCGAAGGAG GCCGCGAACC AGATCATGAC GATGGTCCAG
GACTGCGACC TGATCAACCC CACCTTCGGC TGGAAGGACC CCGAGCACAC CTTCGTGCAC
CCGACCACCT TCACCATGGC GAAGTTCATG TACTGGGCCT CGGTGAAGAG CCCGGGCGAA
ATGCACGACC TGGGCCGCGA GTTCCTGAAG GGAATCCTCA AGGCCGGACG CAAGGTTCGC
AAACTGCTCT AA
 
Protein sequence
MSTIVTATGK APGEGKVQHC DVFILGSGLA GSTAAAILQH NGCNVVLVDA SAHPRFAVGE 
SMIPQLVEWL HILAERFDVP EIKNLASIGA STKNIGPSFG SKGHFGFMRH EPGKEPNPKE
ATQLAIPKVL TQASHLFRQD SDSYMFNVAA KYGVTTRQYW RAADLDFDDD GVTVTGQNGE
VFRAKYLIDA SGFRSPLAEK YGLREQPARF KHHSRSMFSH YIGIKPFDDV VDHPASVRPP
MRWHNGTMHH LIDRGWFWII PFDSYKDSTN PLCSVGLTID ERTYPKNKDM TAEEEFNFFL
DQYPAVKRQF EGAHKVREWV STDRLQYSSS RSIGDRWCLM SHAAGFIDPL FSRGLSNTFE
VINSLAYRIL QGMKDGDFSA ERFEYVEKLE RGLLQYNDDL VNSSFISFSD FDLWNSVFRV
WGAFITPGVM RLTRARMLFL KTGEDKYFQE LEDAEHTGLW WPESTTVKNM LERTAEICEK
HEVGELTSKE AANQIMTMVQ DCDLINPTFG WKDPEHTFVH PTTFTMAKFM YWASVKSPGE
MHDLGREFLK GILKAGRKVR KLL