| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3530 |
|---|
| Symbol | |
|---|
| ID | 8334883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3943508 |
|---|
| End bp | 3944545 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644956674 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003114277 |
|---|
| Protein GI | 256392713 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCCG ATGAGATCAC CCGGCTGTTC GACCTGCCGG AGTTCCGCCT CCTGCCCGGG
GAACGGAGGG CCGCCTGGGG TCCCGAGCTC GACGACCACG TGATCGACTT CGCCTGCCGG
ACCGGGTTGC TGACGACGCC GGCGGCCCGG CGGTACTACG CCTCGCAGCG GATCGGGACG
ATGTGCGCCT ACGTCGTCCC CGGCGCGCTC TCGCCGCGCC GGTATGAGAT CTACGGCGAG
CTGATGACGT GGTTCTTCAT CTACGACGAC TGGGCCGAAC AGCTCGGGAA CCACCTCTCG
CCGCAGCAGG TGTCCGGCGT GACCGACGTC GTCCACACCT GGTTCGCCGA GGACGAGCGC
GACGTCGTCA TGCTCGATGC GCCTCTGGCT CAGAGCATGC GCGGGATCTG GGCGAAGCTC
CAGGAGGACA CCTCGCTGGA GTGGCGCCGG CGGCTGCTGG CCGAGACCGA CGGGTATCTG
AGAACCGCCG CGGAGGAGGC GATCCTGGTC AGCACCGGCC GGGTGAACTC CTTCGGCAAG
GCCAGCGAAC TGCGGCCGAC CGCCACCGCG GCGGCGCCGG TGTTCATGAT GGCCGAGCAC
TCCTACGGCA TCGAGATCCC GATGGACGTC GTCCGGCATC CGTTGGTGCG GAAGGCGATG
CGTGCCGCCG CCGCGGCCAT CGCGTACGGC AACGACATCA TCGGGCTGAA GTCGGATCTG
CTGCGCGGCA TCCGCGACAA CCTGGTTCTG TCGCTGCAGC AGGAGTACGG CGGCGATCTG
CAGCTGAACG TCGAGCGGGC CGCCGAGCAC TACCAGCGCG CCGCCGGGAC GCTCACGGCT
CTGCGCGAGG ACCCGGAGGC CGGCGGAAGG GAAGACGTGG CGGTCTTCTT CCAGATCCTG
GAGGACTGGG TGTACGAGGG CGTCAAATGG CAGCTCCGCG ACACCGACCG GTACAGCTCG
ACGGTGCGGC TGACGCAGGA GGAGAATCCG AACCAGCTCC TGGCCTTGGC GGCATCCTCC
GCGCTCGCGG ACTGCTGA
|
|---|
| Protein sequence | MPADEITRLF DLPEFRLLPG ERRAAWGPEL DDHVIDFACR TGLLTTPAAR RYYASQRIGT
MCAYVVPGAL SPRRYEIYGE LMTWFFIYDD WAEQLGNHLS PQQVSGVTDV VHTWFAEDER
DVVMLDAPLA QSMRGIWAKL QEDTSLEWRR RLLAETDGYL RTAAEEAILV STGRVNSFGK
ASELRPTATA AAPVFMMAEH SYGIEIPMDV VRHPLVRKAM RAAAAAIAYG NDIIGLKSDL
LRGIRDNLVL SLQQEYGGDL QLNVERAAEH YQRAAGTLTA LREDPEAGGR EDVAVFFQIL
EDWVYEGVKW QLRDTDRYSS TVRLTQEENP NQLLALAASS ALADC
|
|---|
| |