| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3514 |
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| Symbol | |
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| ID | 8334867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3919542 |
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| End bp | 3920531 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644956658 |
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| Product | polymorphic membrane protein |
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| Protein accession | YP_003114261 |
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| Protein GI | 256392697 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00452476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.074311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGTCGT TCGGGAATCC GAATGGGCAT GCGGCGGTTC CGGCGGCGGG GCGGGCGGTT
GATGTGTCGC GTCCCACGAC TGTTGTCGGT GATGGGAGCG TGGGGAGTTG TACGTCGGCT
GCTGTGGTGG CGGCGGTTGC CAAGGGTGGG GTGATCACCT TTTCGTGTGG GTCGGCGCCG
GTGGTGATCA CGATGGCGGC TACGGCGAAG GTGGTCAACA GTGCGGCGCG GGTGGTGATT
GATGGCGGGG GCAAGGTGAC GCTGAGTGGG GGCGGGCAGC GGCGGATCTT GTACATGAAC
ACTTGTGACA AGGCGCAGAC GTGGACGACG TCGCATTGTC AGAACCAGTC GCAGCCTCAG
CTGACGTTGC AGAACATCAC GTTCGCCGAT GGGAACTCGA CTGGGCAGCA GGCGTTCGGG
GGCGGGGGCG GGGCGGTGTT CGCCAGCGGG GGGAGGCTGG CGATCGTCAA TGCTCGCTTC
GTCGGCAATC GGTGTGACTC GACCGGGCCG GACCTGGGTG GGGCGGCGGT GCGGGCGTTG
CAGCAGTGGC AGAATCAGCC GGTCTACGTC GTCGGGAGCA CCTTCGGCGG GAGTCCGGGG
CTGGGCGGGG TGTGCTCGAA CGGCGGCGCG CTGAGCAGTA TCGGCGTGTC CTGGGACGTC
ATCAACTGCG TCATGTCCTA CAACAAGGCG ATCGGCAACG GCGCGAACCC GGCGTCGGCC
GGCACGCCCG GTGGCGGCAG CGGCGGCGCC ATCTACACCG ACGGCGACGC CTACACCGTG
ACGCTCGCCG GCACCCGCAT CGAGCACAAC GACGCCAACG AAGGCGGCGG CGCGGTGTTC
TACGTCAGCA ACAACCGGAC CGGGACGTTG ACCATCCGCG ACTCCGCCCT GACGGCCAAC
GTCAGCGCGA AGTTCTCCAC CGCGGGCTAT CCCGGCATCT TCTTCCTGGG AGCCGGTCAC
CCGGTGGTCA GCGGATCGAC GCTCAAATAG
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| Protein sequence | MASFGNPNGH AAVPAAGRAV DVSRPTTVVG DGSVGSCTSA AVVAAVAKGG VITFSCGSAP
VVITMAATAK VVNSAARVVI DGGGKVTLSG GGQRRILYMN TCDKAQTWTT SHCQNQSQPQ
LTLQNITFAD GNSTGQQAFG GGGGAVFASG GRLAIVNARF VGNRCDSTGP DLGGAAVRAL
QQWQNQPVYV VGSTFGGSPG LGGVCSNGGA LSSIGVSWDV INCVMSYNKA IGNGANPASA
GTPGGGSGGA IYTDGDAYTV TLAGTRIEHN DANEGGGAVF YVSNNRTGTL TIRDSALTAN
VSAKFSTAGY PGIFFLGAGH PVVSGSTLK
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