Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3502 |
Symbol | |
ID | 8334855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3906122 |
End bp | 3907675 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644956646 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003114249 |
Protein GI | 256392685 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.558054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00306709 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGTGGCTTT CCGATGTGCT CGAACGCAAC CGCGTCCGGT ACCCCGACGG CGTCGCTTTG CGCGATCGTC GGCGCGACCT CACCTGGGAC GCCCTGTACT TCGAGGTAGG CGCGTTCGCC CGGGAACTGT CCCGCAGCGT GCCGCTCGGC AGCCGGGTCG TCGTGCTCAG CGGTAACCGG CTGGAGATGA TCGAGGCCTA TCTCGCCTGT GCGGCGGCCG GAATGGTTGC CACACCAGTG AATCCGGCGT TGACGGCTCC GGAACTGGCC GGGATTTTCG AGGGTGTCGA GCCGGCGTTG GCGATAGCCG ATGAGGCGGG GCGTACTCGG CTGGCTGCCG AGCACCCGGG TCTGAAGACC GTGGCGATCG AACAGGTCGC GCAGTTTGCC GCCGTCGAGG CCGCCTCGGC GCAGCCCGCT CCCCCGCTGC CGCGGGCGGC CACGCTGACC GAGCCGTTCG CGATCATGCA CACGTCGGCG ACCACCGGCC GTCCCAAGGG CGTCGTGGTC GACCAGCGCT CGGTGCAACT CAAGGCTCTG TCTTGGCTCG CCGAGGTCGA CTGCGGTCCG GACACCGTGT TCCTCGACGC GTGCCCGCTG TTCCACGGCA GCGTCGTCAA TGCCCTGGCT TACCTCGGGG CGGGCTCCAC CTTGTGCGTG CTGGACGACT TCACGCCGCA GGGCTGTCTG AGCGCGCTGG AGCAGTGGCG GGTTCAGCAC GTGTTCGTCG TACCGTCCAT GGTGCGGCTG CTCCTGGAAG CCCGAGGGCT GGCCACCGCC GACCTGACCG CGTTGGAACT CGTCGTGCAC GCGGCCGCGC CGATGCCCGC GGAGCTGGCC GAGCAGGCCA CGACCGCGCT CGGCGCCGGC CTGATGACCG TCTACGGCAT CACCGAGGGC GGCGGCCCGA GCCTGGTGCT GGAGCCCGCC GACCAGCCCG GTCCGGCACC GGCGCCCGGA GCCACGTGCG CCGGGCTGCC GATGCTCGGC GTCAGCGCGC GGATCGCCCG GGAGGACGGG AGCCAGGCCG AGCCCGGCGA GATCGGTGAG CTGTGGCTCG CCGGCGACGG CTTGATGCTC GAGTACTGGC GCGACCCGCA CGCCACCGCC GCGGTCGTGC ACGAGGGCTG GCTGCGCACG CACGACCTGG GCTGCCGGGA CGCCGCGGGG CTGATCTGGC TGGTGGACCG ACGCAACGAC CTGATCCTGC GCGGCGGACA GAATGTCTAC CCCGCCGAGA TCGAGGAGGT GCTGCGCAGC AGTGCGCAGG TGGCCGACGC CGCGGTGGTG CCGGTGCCCT CGGCGGTGTG GGGGCAGGCG CCGTTCGCCT TCGTCCAGCC CGCCGCGCCG GGCGTCTTCG ACGAGCGCGC GCTGCTCGCG CTCTGCGTCG CGCGGCTGGC CAGCTACAAG CGGCCGGTGC GCTTCGTGGC GGTGGACGCC ATCGCCCGCA GCCCCGCCGG GAAGATCCTG CGCGGGCGGC TGCGCCAGCA CGCCGAGGAC CTGTCGGCAC CGACCGACCG GGACACCGCG CCGACCCAGA CAGCAGGCTC CTGA
|
Protein sequence | MWLSDVLERN RVRYPDGVAL RDRRRDLTWD ALYFEVGAFA RELSRSVPLG SRVVVLSGNR LEMIEAYLAC AAAGMVATPV NPALTAPELA GIFEGVEPAL AIADEAGRTR LAAEHPGLKT VAIEQVAQFA AVEAASAQPA PPLPRAATLT EPFAIMHTSA TTGRPKGVVV DQRSVQLKAL SWLAEVDCGP DTVFLDACPL FHGSVVNALA YLGAGSTLCV LDDFTPQGCL SALEQWRVQH VFVVPSMVRL LLEARGLATA DLTALELVVH AAAPMPAELA EQATTALGAG LMTVYGITEG GGPSLVLEPA DQPGPAPAPG ATCAGLPMLG VSARIAREDG SQAEPGEIGE LWLAGDGLML EYWRDPHATA AVVHEGWLRT HDLGCRDAAG LIWLVDRRND LILRGGQNVY PAEIEEVLRS SAQVADAAVV PVPSAVWGQA PFAFVQPAAP GVFDERALLA LCVARLASYK RPVRFVAVDA IARSPAGKIL RGRLRQHAED LSAPTDRDTA PTQTAGS
|
| |