Gene Caci_3502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3502 
Symbol 
ID8334855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3906122 
End bp3907675 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content72% 
IMG OID644956646 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_003114249 
Protein GI256392685 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.558054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00306709 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTGGCTTT CCGATGTGCT CGAACGCAAC CGCGTCCGGT ACCCCGACGG CGTCGCTTTG 
CGCGATCGTC GGCGCGACCT CACCTGGGAC GCCCTGTACT TCGAGGTAGG CGCGTTCGCC
CGGGAACTGT CCCGCAGCGT GCCGCTCGGC AGCCGGGTCG TCGTGCTCAG CGGTAACCGG
CTGGAGATGA TCGAGGCCTA TCTCGCCTGT GCGGCGGCCG GAATGGTTGC CACACCAGTG
AATCCGGCGT TGACGGCTCC GGAACTGGCC GGGATTTTCG AGGGTGTCGA GCCGGCGTTG
GCGATAGCCG ATGAGGCGGG GCGTACTCGG CTGGCTGCCG AGCACCCGGG TCTGAAGACC
GTGGCGATCG AACAGGTCGC GCAGTTTGCC GCCGTCGAGG CCGCCTCGGC GCAGCCCGCT
CCCCCGCTGC CGCGGGCGGC CACGCTGACC GAGCCGTTCG CGATCATGCA CACGTCGGCG
ACCACCGGCC GTCCCAAGGG CGTCGTGGTC GACCAGCGCT CGGTGCAACT CAAGGCTCTG
TCTTGGCTCG CCGAGGTCGA CTGCGGTCCG GACACCGTGT TCCTCGACGC GTGCCCGCTG
TTCCACGGCA GCGTCGTCAA TGCCCTGGCT TACCTCGGGG CGGGCTCCAC CTTGTGCGTG
CTGGACGACT TCACGCCGCA GGGCTGTCTG AGCGCGCTGG AGCAGTGGCG GGTTCAGCAC
GTGTTCGTCG TACCGTCCAT GGTGCGGCTG CTCCTGGAAG CCCGAGGGCT GGCCACCGCC
GACCTGACCG CGTTGGAACT CGTCGTGCAC GCGGCCGCGC CGATGCCCGC GGAGCTGGCC
GAGCAGGCCA CGACCGCGCT CGGCGCCGGC CTGATGACCG TCTACGGCAT CACCGAGGGC
GGCGGCCCGA GCCTGGTGCT GGAGCCCGCC GACCAGCCCG GTCCGGCACC GGCGCCCGGA
GCCACGTGCG CCGGGCTGCC GATGCTCGGC GTCAGCGCGC GGATCGCCCG GGAGGACGGG
AGCCAGGCCG AGCCCGGCGA GATCGGTGAG CTGTGGCTCG CCGGCGACGG CTTGATGCTC
GAGTACTGGC GCGACCCGCA CGCCACCGCC GCGGTCGTGC ACGAGGGCTG GCTGCGCACG
CACGACCTGG GCTGCCGGGA CGCCGCGGGG CTGATCTGGC TGGTGGACCG ACGCAACGAC
CTGATCCTGC GCGGCGGACA GAATGTCTAC CCCGCCGAGA TCGAGGAGGT GCTGCGCAGC
AGTGCGCAGG TGGCCGACGC CGCGGTGGTG CCGGTGCCCT CGGCGGTGTG GGGGCAGGCG
CCGTTCGCCT TCGTCCAGCC CGCCGCGCCG GGCGTCTTCG ACGAGCGCGC GCTGCTCGCG
CTCTGCGTCG CGCGGCTGGC CAGCTACAAG CGGCCGGTGC GCTTCGTGGC GGTGGACGCC
ATCGCCCGCA GCCCCGCCGG GAAGATCCTG CGCGGGCGGC TGCGCCAGCA CGCCGAGGAC
CTGTCGGCAC CGACCGACCG GGACACCGCG CCGACCCAGA CAGCAGGCTC CTGA
 
Protein sequence
MWLSDVLERN RVRYPDGVAL RDRRRDLTWD ALYFEVGAFA RELSRSVPLG SRVVVLSGNR 
LEMIEAYLAC AAAGMVATPV NPALTAPELA GIFEGVEPAL AIADEAGRTR LAAEHPGLKT
VAIEQVAQFA AVEAASAQPA PPLPRAATLT EPFAIMHTSA TTGRPKGVVV DQRSVQLKAL
SWLAEVDCGP DTVFLDACPL FHGSVVNALA YLGAGSTLCV LDDFTPQGCL SALEQWRVQH
VFVVPSMVRL LLEARGLATA DLTALELVVH AAAPMPAELA EQATTALGAG LMTVYGITEG
GGPSLVLEPA DQPGPAPAPG ATCAGLPMLG VSARIAREDG SQAEPGEIGE LWLAGDGLML
EYWRDPHATA AVVHEGWLRT HDLGCRDAAG LIWLVDRRND LILRGGQNVY PAEIEEVLRS
SAQVADAAVV PVPSAVWGQA PFAFVQPAAP GVFDERALLA LCVARLASYK RPVRFVAVDA
IARSPAGKIL RGRLRQHAED LSAPTDRDTA PTQTAGS