| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3493 |
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| Symbol | |
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| ID | 8334846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3888375 |
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| End bp | 3891851 |
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| Gene Length | 3477 bp |
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| Protein Length | 1158 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644956637 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003114240 |
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| Protein GI | 256392676 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.035247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.808735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTCA GTCAACAGGC GCCGCCTTTG CGCGCCCGAA ATCCACGTAT GACCTCCCTG
GTGGTGACCC TGGTCGTCGC CCTCATCAGC ACGCTGATGG TCGCGATCGT CACCGGCTCG
GCGCACGCCG CGCCCTCGCT GCTCTCGCAG GGCAAGGCCG CGACCGCCTC GTCGGTCACC
GGAGGGAACA CCGCCGCGAA CGCGGTGGAC GGCAACACCG GCACCCGCTG GGAGAGCGCC
TACAGCGACC CGCAGTGGCT GCAGGTGGAC CTCGGGGCGA CCGCGACGAT CAGCCAGGTC
GTCCTCCAGT GGGAGACGGC CGCGGCGAAG TCCTTCCAGA TCCAGGTCTC CTCCGACGGT
TCGAACTGGA CGTCCGTCTA CTCCACGACC ACCGGTCCCG GCGGCACGCA GACGGTGAAC
GTCACCGGCA GCGGCCGCTA CGTCCGCATG TACGGCACCG CACGCACCAC CGGCTACGGC
TATTCGCTGT GGGAGTTCCA GGTCTACGGC ACAACCGGGA CCGGTACCGG CGGCGGGACC
TGCGGCACCC AGAACGCGGC GCTGAACCGT CCCGTCACCG CCTCCTCGGC GGAGAACGCC
GGCACTCCGG CCGCCGCCGC CGTCGACGGC AACACCGGAA CCCGTTGGTC CAGCGCGTTC
AGCGACCCGC AGTGGCTCGA CGTGGACCTG GGGTCCACGG TCACGATCTG CCAGGTCAGC
CTCCAGTGGG AGACCGCGTA CGCCACCGCG TTCCAGATCC AGACCTCGAC CGACAACACG
AACTGGTCGA CGGTCTACTC CACGACCACC GGGACCGGCG GGACGCAGAC GCTGACCGTC
GCGGGTACCG GCCGCTACGT CCGCATGTAC GGCACGGCGC GCAACACCGC CTACGGCTAC
TCCCTGTGGG AGTTCGGCGT GTTCACCGGC GGAGGCGGCG GTTCGACCTC GCCCAGCTCG
CCCAGCTCAT CGCCCAGCAG CTCCGGCGGC GGGAACGGCA CCTGCGGCAC CGCCAACGCG
GCGCTCGGGC ACCCGGCGAC CGCCTCCTCG ATCCAGGACG CCAACCCGGC CTACGACCCC
TTCTACGCCA CTGATGGCAG TACCCTGACC CGCTGGTCCA GCGCGTCGGC CGACGGGCAG
TGGATCGACG TGGACCTCGG GGGGAGCCTG CCGGTCTGCC AGGTCGTCCT GCAGTGGGAG
AACGCCTACG CCTCCGGCTT CCAGATCCAG GTCTCGAACG ACAACGCGAA CTGGTCGACG
ATCTACACCA CGACCACCGG GACCGGCGGG ACGCAGACGG TGAACCTCTC GGGCACCGGT
CGCTACGTCC GCATGAACGA GACGGCGCGC GCCACCGGTT ACGGCGTGTC GCTGTGGGAG
ATCTCCGTCT ACACGGTCGG CAACCAGACC GTCACCATCC CGCCGCCTCC GCCGCAGCCG
GCGCCGGGCA ACTGCCCCTG GCTCAACAAG CCGACCGTGG CCGTCTCGAC CCGCGTGGCG
CAGCTGATGG GCGCGATGTC GCAGGACCAG AAGGACGCGA TGCTCTACGG CGACGGGTCC
AGCACCTACA TCGGGCAGAT CGCCGCGCAG CCCGCGCTGT GCATCCCGAG CGTCAACCTG
GAGGACGGGC CCACCGGTGT GGGCGACGGA CTCGGCGGGG TGACGCAGTT CCCTGACGGC
GAGACGTCGG CAGCCACCTT CGACCCGTCC TACGAGCACG CTTTCGGTGT GGCAGTCGGC
CAGGAGTTCG CCGGCAAGGG CGTGAACGTC TCGCTCGGCC CGACAATCAA CCTGGTGCGC
GACCCGCGTT GGGGACGCGC CTATGAGACG TTCGGCGAGG ACCCCTACCT GACCGGCGAG
ATCGTCAGCG CCGACGTCCA GGGGATGCAG AGCCAGGACG TCATGGCCGA GGTCAAGCAC
GCGGCGGCGT ACAACATCGA GCAGCCGTCG GCGCCCGGCA ACGAGATCAT CGACACCCGC
ACGCTGCAGG AGATGTACCT GCCGGGCTTC CAGACCGCCA TCGAGAAGGG CGGCGCGGCG
GCGCTCATGT GCGGGTACAG CATGGTGAAC GGCAACTACT CCTGCCAGAA CCCGGCGGTG
GAGAACACCC CGATGTACCA GCAGGCCGGG TTCCAGGGCT TCATCACCTC GGACTGGGGC
GGGATCCACT CCACCGTGCC GTCGGCGAAC GCCGGGGAGA CGGTCGAGAT GCCCTTCGGC
GGGTTCTTCG CCGCCTCGCT GGAGCAGGCG GTCGCCGCCG GGCAGGTCAC CCAGGCCACC
TTCGACACGA TGGTGTCCCG GGTCCTGACC CAGATGTTCC GCTTCGGCAT GTTCGACAAG
GCGCCGAGCG GTTCCACCAC CGCCATCGTC GCCACGCCGG CGCACCGCGC GGTCGCGCTG
CAGGGCGACG AGGAAGGCTC GGTGCTGTTG AAGAACAACG GCGTCCTGCC GCTGAGCCCG
AGCGGCGGGG AGTCCGTGGC CGTCATCGGC CAGAACGCCG GCGCCGGGGT CATCACCGGG
GGCGGCGGCA GCGGCAGCGC CACCAGCACC GGCACGTACA ACCCGCTCTA CGGCATCCAG
CAGCGGACCG CCGGCACGAA CGTCAAGGTC GCCTACGACG ACGGCACGAA CCAGGCCTCC
GCGGTCGCGC TCGCGCAGTC CTCGAACGTG GCGATCGTCT TCGCCTCCGA CAACTACGGC
CACGAGGAGG CCGACACCAC CACGCTCAAC CTGCCGAACA ACCAGGACGC GCTGATCTCC
GCGGTCGCCG CGGCCAACCC GCACACGATC GTCGTGCTCA GCGACAACTC GGCGATCATG
ATGCCCTGGC TGAACCAGGT CGCGGGCGTC TTCGAGACCT TCTACCAGGG CCAGGAGTTC
GGCCAGGCGA TAGCCGCGCT GCTGTTCGGC GACGTGAACC CCTCCGGGCA CCTGCCGATC
ACCTTCCCGA ACTCCCTCAC CCAGGTCCCG GCCAGCACCC CGGCCCAGTG GCCGGGCGTC
AACGGCACCG TGCAGTACTC CGAAGGCCTC GACGTCGGCT ACCGCTGGTA CGACGCGAAC
AACGTCGCGC CACTCTTCCC CTTCGGCTAC GGCCTGTCCT ACACCACCTT CTCCTTCAGC
AACCTGCAGA TCGGCGCACT GACCAACGGC CAGGCAACCG TCACCGCGAC GGTCACCAAC
ACCGGCAGCC GCGCCGGAAC CGAGGTGGCC CAGCTCTACG TCAGCGACCC CGCCTCCGCC
GGCGAACCAC CGCACCAGCT CAAGGGCTTC CAACGCACCA CCCTGAACCC CGGAGCCTCC
ACCACCGCCA CCTTCACCGT GTCAGCCCAC GATCTAGCCC ACTGGGACAC CACCTCCAGC
AACTGGATCG CCTCCGCCGG CACCTACCAG ATCCTCGTCG GCGACAGCTC CCGCAGCCTG
CCGCTGACCG GGAACCTCAC CAACCCGACG ACCGTTACCG CGAACGCTAT GGACTGA
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| Protein sequence | MAVSQQAPPL RARNPRMTSL VVTLVVALIS TLMVAIVTGS AHAAPSLLSQ GKAATASSVT
GGNTAANAVD GNTGTRWESA YSDPQWLQVD LGATATISQV VLQWETAAAK SFQIQVSSDG
SNWTSVYSTT TGPGGTQTVN VTGSGRYVRM YGTARTTGYG YSLWEFQVYG TTGTGTGGGT
CGTQNAALNR PVTASSAENA GTPAAAAVDG NTGTRWSSAF SDPQWLDVDL GSTVTICQVS
LQWETAYATA FQIQTSTDNT NWSTVYSTTT GTGGTQTLTV AGTGRYVRMY GTARNTAYGY
SLWEFGVFTG GGGGSTSPSS PSSSPSSSGG GNGTCGTANA ALGHPATASS IQDANPAYDP
FYATDGSTLT RWSSASADGQ WIDVDLGGSL PVCQVVLQWE NAYASGFQIQ VSNDNANWST
IYTTTTGTGG TQTVNLSGTG RYVRMNETAR ATGYGVSLWE ISVYTVGNQT VTIPPPPPQP
APGNCPWLNK PTVAVSTRVA QLMGAMSQDQ KDAMLYGDGS STYIGQIAAQ PALCIPSVNL
EDGPTGVGDG LGGVTQFPDG ETSAATFDPS YEHAFGVAVG QEFAGKGVNV SLGPTINLVR
DPRWGRAYET FGEDPYLTGE IVSADVQGMQ SQDVMAEVKH AAAYNIEQPS APGNEIIDTR
TLQEMYLPGF QTAIEKGGAA ALMCGYSMVN GNYSCQNPAV ENTPMYQQAG FQGFITSDWG
GIHSTVPSAN AGETVEMPFG GFFAASLEQA VAAGQVTQAT FDTMVSRVLT QMFRFGMFDK
APSGSTTAIV ATPAHRAVAL QGDEEGSVLL KNNGVLPLSP SGGESVAVIG QNAGAGVITG
GGGSGSATST GTYNPLYGIQ QRTAGTNVKV AYDDGTNQAS AVALAQSSNV AIVFASDNYG
HEEADTTTLN LPNNQDALIS AVAAANPHTI VVLSDNSAIM MPWLNQVAGV FETFYQGQEF
GQAIAALLFG DVNPSGHLPI TFPNSLTQVP ASTPAQWPGV NGTVQYSEGL DVGYRWYDAN
NVAPLFPFGY GLSYTTFSFS NLQIGALTNG QATVTATVTN TGSRAGTEVA QLYVSDPASA
GEPPHQLKGF QRTTLNPGAS TTATFTVSAH DLAHWDTTSS NWIASAGTYQ ILVGDSSRSL
PLTGNLTNPT TVTANAMD
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