| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3485 |
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| Symbol | |
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| ID | 8334838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3876688 |
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| End bp | 3878385 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644956629 |
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| Product | histidine kinase |
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| Protein accession | YP_003114232 |
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| Protein GI | 256392668 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTGC GGCGCACCAC CCGGTATTGG CTCGTCGTCG GAACAACGGT GGCCTCGGTC
GTCCTGGCCG CGTTGGCCGC GCTCGCCATG GCGGCGGCGA ACCACGCCTC CGACGCCACG
CACACCATGG CCGACCGCGA CTCCCCCGCG CTGACCGCGT CCGTGAGCCT GGAGTCGGCG
ATGGTCAATC AGGAGACCGG CGTCCGGGGT TACGGCTTGT CCGGGAGCAG CGAGTTCCTC
CAGCCCTACA CCCAGGGTGT CGCCGACGAG CAGCACGCGG TGGCGACCCT GCGCAGCCTT
CGAGCCGGCG GCGCGGAAGG GGTGCGCCGG CTGGACGAGG TCGTGGCTCT GGCCCAGGCC
TGGCAGACCT CCTACGCCCA GCCGGTCGCC GCCTCCACGC CGGCGGACGC CCGCGCGCTC
AGCAGCGCGC GGCTGGACGC GGCGAAGACG AAGTTCGACG CGCTGCGCAC GGCGATGACC
GGCCAGCAGG CCCAGCTCCA GCGGACCCGC CAGGACGCGC GCGCCGACCT GACCACCGCC
GAGCGGCAGC GCGATGAGGT CTTCTTCGCC GTCGCCGTGG CGATCGTGGC GATGATGCTC
CTGGTCTTCG AAGGGCTGCG CCGCGGCGTG ACCCGGCCGC TGGCCGGATT GTCCGCCGAC
GCCCGGCAGG TCGCCTCGGG CGACCTGAAC CACCCCATCG CCCCGAACGG CCCGTCGGAC
CTGCGCGACC TGGCCGGCGA CGTGGAGGCC ATGCGCCGCC GCCTGGCCGA CGAGCTGACG
GCGGTCGAGC ACGCCCGGCG GATGCTGGAC GATCAGGCGG CGGATCTGGA GCGCTCCAAC
GCCGAACTCG AGCAGTTCGC CTACGTCGCC TCCCACGACC TGCAGGAGCC GCTGCGCAAG
GTCGCCAGCT TCTGCCAGCT GCTCCAGCGC CGCTACGCCG ACCAGCTCGA CGAGCGCGCG
AACCAGTACA TCGAGTTCGC CGTGGACGGC GCGAACCGCA TGCAGACCCT GATCCAGGAC
CTGCTGGCGT TCTCCCGCGT CGGCCGCACC TTCGACGCCG AGGGCGTCGT GGACCTGGAG
GCGGTCTTCG ACCGCGTGCT GGACACCTTG AGCATCGCGA TCGAGGAGAC CGGCGCGCAG
GTCACCCACG ACCGGCTCCC GACCGTGGCC GGCGACCAGA CGCAGATGGG CATGCTGCTG
CAGAACCTGA TCTCCAACGC CGTGAAGTTC CGCGACCCCG AGCGGCCGCC GCGGATCGAG
GTCACGGTCG CCCGCGTCGG GGGGAACGGT TCCGACGAAG CGGACGAGAA CCCCGCGTCC
GGCAGTTCCC AGGACGCAGA GAGTAACGGC GCCGACACCT CCACCGACCC GGACGAAACC
GGCGGCGAGT GGGAGATCGC CGTCGCCGAC AACGGCATCG GCATCCCCGC CGAGTACGCC
GACCGGGTCT TCGCGATCTT CCAGCGGCTG CATTCCCGCG ACGCCTACCC GGGCAACGGC
ATCGGGCTCG CCGTCTCCCG CAAGATCGTC GAGCTGCACG GCGGCCGGAT CGCGATCGAC
CCGGACCGCG AGACCGGCGC GCGTATCGTC ATCACCTTCC CTGTCCGCGC GGACGAAGCG
GACGCGACAG AGGGAGCAGC AGAAGAAGCA CAACCCGCCG ACGCCGGCGA CGACATCCGT
GGAGACCAGA CACCGTGA
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| Protein sequence | MPVRRTTRYW LVVGTTVASV VLAALAALAM AAANHASDAT HTMADRDSPA LTASVSLESA
MVNQETGVRG YGLSGSSEFL QPYTQGVADE QHAVATLRSL RAGGAEGVRR LDEVVALAQA
WQTSYAQPVA ASTPADARAL SSARLDAAKT KFDALRTAMT GQQAQLQRTR QDARADLTTA
ERQRDEVFFA VAVAIVAMML LVFEGLRRGV TRPLAGLSAD ARQVASGDLN HPIAPNGPSD
LRDLAGDVEA MRRRLADELT AVEHARRMLD DQAADLERSN AELEQFAYVA SHDLQEPLRK
VASFCQLLQR RYADQLDERA NQYIEFAVDG ANRMQTLIQD LLAFSRVGRT FDAEGVVDLE
AVFDRVLDTL SIAIEETGAQ VTHDRLPTVA GDQTQMGMLL QNLISNAVKF RDPERPPRIE
VTVARVGGNG SDEADENPAS GSSQDAESNG ADTSTDPDET GGEWEIAVAD NGIGIPAEYA
DRVFAIFQRL HSRDAYPGNG IGLAVSRKIV ELHGGRIAID PDRETGARIV ITFPVRADEA
DATEGAAEEA QPADAGDDIR GDQTP
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