Gene Caci_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3478 
Symbol 
ID8334831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3870141 
End bp3870476 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content74% 
IMG OID644956622 
Producttranscription factor WhiB 
Protein accessionYP_003114225 
Protein GI256392661 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.712912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTCC TCATCCCCCT CGCCCCCCTC GACGAAGACC CCGTCCGCCG CCACGAGTGG 
CACGAGCAGG CCGCCTGCCG CGACCACGAC ACCGACCTCT TCTTCGACCC GGCCCACGAG
CGGCACTCCG ATCGCGTCCG CCGCGAACAG GCCGCGAAGA AGATCTGCGC CACCTGCCCG
GTCCAGGCCG AATGCCTGCG CTTCGCCGAG TCGACCCCCG AACGCTTCGG CGTCTGGGGC
GGCACCACGC AGCGCGAACG TGCCACCCAC CGACGCCGCG GTCGCCGCGC CGGCACGCTG
CCGGGATCGC GGGGACCTGC GGCGGGGCGT CCGTGA
 
Protein sequence
MHVLIPLAPL DEDPVRRHEW HEQAACRDHD TDLFFDPAHE RHSDRVRREQ AAKKICATCP 
VQAECLRFAE STPERFGVWG GTTQRERATH RRRGRRAGTL PGSRGPAAGR P