Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3478 |
Symbol | |
ID | 8334831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3870141 |
End bp | 3870476 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644956622 |
Product | transcription factor WhiB |
Protein accession | YP_003114225 |
Protein GI | 256392661 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.712912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGTCC TCATCCCCCT CGCCCCCCTC GACGAAGACC CCGTCCGCCG CCACGAGTGG CACGAGCAGG CCGCCTGCCG CGACCACGAC ACCGACCTCT TCTTCGACCC GGCCCACGAG CGGCACTCCG ATCGCGTCCG CCGCGAACAG GCCGCGAAGA AGATCTGCGC CACCTGCCCG GTCCAGGCCG AATGCCTGCG CTTCGCCGAG TCGACCCCCG AACGCTTCGG CGTCTGGGGC GGCACCACGC AGCGCGAACG TGCCACCCAC CGACGCCGCG GTCGCCGCGC CGGCACGCTG CCGGGATCGC GGGGACCTGC GGCGGGGCGT CCGTGA
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Protein sequence | MHVLIPLAPL DEDPVRRHEW HEQAACRDHD TDLFFDPAHE RHSDRVRREQ AAKKICATCP VQAECLRFAE STPERFGVWG GTTQRERATH RRRGRRAGTL PGSRGPAAGR P
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