Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3475 |
Symbol | |
ID | 8334828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3867403 |
End bp | 3867933 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644956619 |
Product | Calcium-binding EF-hand-containing protein |
Protein accession | YP_003114222 |
Protein GI | 256392658 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.072615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGCG AATTCCAGCG ACGGAAGGTC GCAGGCGTCT TCGACGCGAT GGACAAGAAC CGGCGGGGGT ATCTGACCGA GGCCGACTTC CAGGACCTCG CGGCGCGGTG GACCACGCTG CGCGGCATCG AGCCCGGCGG CGAGGACTAC GAACGCCTCC GGGCGATCAT GCTGGGCTGG TGGTCCTCGC TCAGCGCGGC GGCGGAGGAC GGCGAGCGCG TGAAGCTGGA CGACGTCCTC GCGGTCGTCG ACGTCCTGCC GACGATGACC GAGGCGATGA CCGCGACCGC CGACGCCATG TTCGAGGCCA TCGACGAGAA CGGCGACGAC CTCGTCTCCC GCACCGAGTA CCACCAGCTC ATCGAAGCCT GGAACGGCGC CCCGACCGAC ACCGACGCCA CCTTCGCCCT CCTCGACCTC GACGCCGACG GCTACCTCTC CCACCAGGAA TTCCGCCGCC TCTGGACCCA GTTCTGGTCC GGCGACGACC CCGCCGACCC CGGCACCTGG GTCTTCGGCC GCTTCGAGTA G
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Protein sequence | MASEFQRRKV AGVFDAMDKN RRGYLTEADF QDLAARWTTL RGIEPGGEDY ERLRAIMLGW WSSLSAAAED GERVKLDDVL AVVDVLPTMT EAMTATADAM FEAIDENGDD LVSRTEYHQL IEAWNGAPTD TDATFALLDL DADGYLSHQE FRRLWTQFWS GDDPADPGTW VFGRFE
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