Gene Caci_3475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3475 
Symbol 
ID8334828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3867403 
End bp3867933 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content70% 
IMG OID644956619 
ProductCalcium-binding EF-hand-containing protein 
Protein accessionYP_003114222 
Protein GI256392658 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.072615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCG AATTCCAGCG ACGGAAGGTC GCAGGCGTCT TCGACGCGAT GGACAAGAAC 
CGGCGGGGGT ATCTGACCGA GGCCGACTTC CAGGACCTCG CGGCGCGGTG GACCACGCTG
CGCGGCATCG AGCCCGGCGG CGAGGACTAC GAACGCCTCC GGGCGATCAT GCTGGGCTGG
TGGTCCTCGC TCAGCGCGGC GGCGGAGGAC GGCGAGCGCG TGAAGCTGGA CGACGTCCTC
GCGGTCGTCG ACGTCCTGCC GACGATGACC GAGGCGATGA CCGCGACCGC CGACGCCATG
TTCGAGGCCA TCGACGAGAA CGGCGACGAC CTCGTCTCCC GCACCGAGTA CCACCAGCTC
ATCGAAGCCT GGAACGGCGC CCCGACCGAC ACCGACGCCA CCTTCGCCCT CCTCGACCTC
GACGCCGACG GCTACCTCTC CCACCAGGAA TTCCGCCGCC TCTGGACCCA GTTCTGGTCC
GGCGACGACC CCGCCGACCC CGGCACCTGG GTCTTCGGCC GCTTCGAGTA G
 
Protein sequence
MASEFQRRKV AGVFDAMDKN RRGYLTEADF QDLAARWTTL RGIEPGGEDY ERLRAIMLGW 
WSSLSAAAED GERVKLDDVL AVVDVLPTMT EAMTATADAM FEAIDENGDD LVSRTEYHQL
IEAWNGAPTD TDATFALLDL DADGYLSHQE FRRLWTQFWS GDDPADPGTW VFGRFE