Gene Caci_3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3453 
Symbol 
ID8334806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3824464 
End bp3825045 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content71% 
IMG OID644956597 
Producthypothetical protein 
Protein accessionYP_003114200 
Protein GI256392636 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000726577 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGACG TGGTCCTGTT CCACCACGCT CAAGGGCTCA CCACCGGCGT CACGGCCTTC 
GCGGACACCC TCCGCGCCGC CGGCCACGAC GTCCACACCC CCGACCTGTT CGAAGGCCGG
ACCTTCCCGA GCCTGGAGGA GGGCGTCGCC TACGCCGAAG GAGTCGGCTT CGGCGAGATC
GTCGAACGCG GCGCCCGCGC CGCCGACAAG ATCGGCGGCG ACCCCGTCTA CGCCGGCTTC
TCCCTCGGCG TCCTCCCGGC GCAGATGCTC GCCCAGACCC GCCCCGACGC GCGTGGCGCA
CTGCTGTTCC ATTCCTGCGT ACCGGTCTCG GAGTTCGGCT CGGAGTGGCC CGAGGCGGTG
CCGGGACAGA TCCACGCGAT GGACGCGGAC CCCTTCTTCG TCGGCGACGG CGACATCGAC
GCCGCCCGCG CGCTGACCGC CGCGGACCCG GGAGTCGAAC TGTTTCTCTA TCCGGGGCAG
CAACATTTGT TCGCCGACAG CTCGCTGCCT TCTTATGACG CCGCCGCCAC CGCCGTGCTG
ACGCGGCGGG TTCTGGAGTT CCTGCTCGCT GTGCCTGCGT GA
 
Protein sequence
MADVVLFHHA QGLTTGVTAF ADTLRAAGHD VHTPDLFEGR TFPSLEEGVA YAEGVGFGEI 
VERGARAADK IGGDPVYAGF SLGVLPAQML AQTRPDARGA LLFHSCVPVS EFGSEWPEAV
PGQIHAMDAD PFFVGDGDID AARALTAADP GVELFLYPGQ QHLFADSSLP SYDAAATAVL
TRRVLEFLLA VPA