Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3453 |
Symbol | |
ID | 8334806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3824464 |
End bp | 3825045 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644956597 |
Product | hypothetical protein |
Protein accession | YP_003114200 |
Protein GI | 256392636 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00000726577 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCCGACG TGGTCCTGTT CCACCACGCT CAAGGGCTCA CCACCGGCGT CACGGCCTTC GCGGACACCC TCCGCGCCGC CGGCCACGAC GTCCACACCC CCGACCTGTT CGAAGGCCGG ACCTTCCCGA GCCTGGAGGA GGGCGTCGCC TACGCCGAAG GAGTCGGCTT CGGCGAGATC GTCGAACGCG GCGCCCGCGC CGCCGACAAG ATCGGCGGCG ACCCCGTCTA CGCCGGCTTC TCCCTCGGCG TCCTCCCGGC GCAGATGCTC GCCCAGACCC GCCCCGACGC GCGTGGCGCA CTGCTGTTCC ATTCCTGCGT ACCGGTCTCG GAGTTCGGCT CGGAGTGGCC CGAGGCGGTG CCGGGACAGA TCCACGCGAT GGACGCGGAC CCCTTCTTCG TCGGCGACGG CGACATCGAC GCCGCCCGCG CGCTGACCGC CGCGGACCCG GGAGTCGAAC TGTTTCTCTA TCCGGGGCAG CAACATTTGT TCGCCGACAG CTCGCTGCCT TCTTATGACG CCGCCGCCAC CGCCGTGCTG ACGCGGCGGG TTCTGGAGTT CCTGCTCGCT GTGCCTGCGT GA
|
Protein sequence | MADVVLFHHA QGLTTGVTAF ADTLRAAGHD VHTPDLFEGR TFPSLEEGVA YAEGVGFGEI VERGARAADK IGGDPVYAGF SLGVLPAQML AQTRPDARGA LLFHSCVPVS EFGSEWPEAV PGQIHAMDAD PFFVGDGDID AARALTAADP GVELFLYPGQ QHLFADSSLP SYDAAATAVL TRRVLEFLLA VPA
|
| |