Gene Caci_3445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3445 
Symbol 
ID8334798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3816782 
End bp3818065 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content71% 
IMG OID644956589 
Productsodium/hydrogen exchanger 
Protein accessionYP_003114192 
Protein GI256392628 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00243488 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCCTTC CCGCTCATCT GCCGGTCCTG CTCGGTGACC TCGTGCTGAT CATCGCGGTC 
GCGCGCCTGC TCGGCGCTGC GGCGACGCGA CTGGATCAGC CTGCTGTCAT CGGCGAGATC
GTCGGCGGGA TCCTGCTCGG CCCGACGCTG CTCGGTCACT ACAGCTCGAC GGTCTTCTCC
GCCGCTGTGC GGCCGACGCT GTCGGACGTC GCGAACGTCG GCGTCTGCGT GTTCATGTTC
GGCATCGGGG TCGAGCTGGA TCACCGGCTG CTGCGCGGGC AGGCGCGGAC GGCTGCGACG
GTCGCGCTCG GCGCGATCGC GGTGCCCTTC GGGTTCGGTG TGCTGCTGGC GCTCTATTTG
GTGCGGCATC ATCCGACCAC GCACCACGCC GGGTTCGTGC TCTTCATGGG GACGGCGATG
TCGGTCACCG CTTTCCCGGT GCTGGCGCGC ATCCTCACCG ACAAGAAGCT GCTGCGGACG
CCGATCGGCG GGTTGGCGAT GGCGTGCGCG GCGTTCGGCG ACGTGCTGGC GTGGACGCTG
CTGGTGATCT CGGTCGCGCT GGCGCGGGCG GACGGGCATC CGTGGCGGTT GCTGTGGGTG
GTTCCGTATC TCGCGGTGAT GGTCGGTGTG GTGCGTCCGG GGGCGGCGCG GTATGCGCGG
CGTCATGACG GTACCGGGCA GGGCGTCACG CGGCCCGCGA ACCTGCTTGT GCTCGCCGCG
GTCGCGGTCG GGCTCGCCGC CTCGGCGGTG GCGACCGACC GGATGGGACT GCACCAGATC
TTCGGCGCCT TCCTGTTCGG CGTGGTGCTG CCGCGCGAAG GAGTCGCGGC GGTGCGTGAG
CGCGCCCTGC CGTGGATCAC GAAAGTCAGC GCCCTGCTGC TGTTGCCGGT CTTCTTCATC
GTCGCCGGCT TCAAGGTCGA TCTGCGCCAC CTCGACGGCA CCGACGTCGG CGAGCTGGCG
TTGATCCTGC TGGTCGCGAT CGGCGGCAAG CTGCTCGGCG GCTTCGGCGC GGCGCGTGCC
CTCGGGGTCA GCCGGCGGCA CTCCGCGGTC CTGGCCGTGC TGCTGGACAC CCGCGGGCTC
ACCGAGCTGA TCGCGCTGTC GGTCGGCGTC CAGGCCGGCG TGCTCGACGC CCGACTCAAT
GCCCTGATGG TGGTGATGGC CGTGGTCACC ACCACCCTGA CCGGCGTGCT GCTGCGCCGG
GTCTATCCCC CCGAACGCGT GCGCCTCGAC GCCGAGCGCG CCCGTGCCGA CCATCCCCGC
ATCCGACAGG AGCCGACACC ATGA
 
Protein sequence
MTLPAHLPVL LGDLVLIIAV ARLLGAAATR LDQPAVIGEI VGGILLGPTL LGHYSSTVFS 
AAVRPTLSDV ANVGVCVFMF GIGVELDHRL LRGQARTAAT VALGAIAVPF GFGVLLALYL
VRHHPTTHHA GFVLFMGTAM SVTAFPVLAR ILTDKKLLRT PIGGLAMACA AFGDVLAWTL
LVISVALARA DGHPWRLLWV VPYLAVMVGV VRPGAARYAR RHDGTGQGVT RPANLLVLAA
VAVGLAASAV ATDRMGLHQI FGAFLFGVVL PREGVAAVRE RALPWITKVS ALLLLPVFFI
VAGFKVDLRH LDGTDVGELA LILLVAIGGK LLGGFGAARA LGVSRRHSAV LAVLLDTRGL
TELIALSVGV QAGVLDARLN ALMVVMAVVT TTLTGVLLRR VYPPERVRLD AERARADHPR
IRQEPTP