Gene Caci_3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3444 
Symbol 
ID8334797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3815937 
End bp3816785 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content72% 
IMG OID644956588 
Productphenazine biosynthesis protein PhzF family 
Protein accessionYP_003114191 
Protein GI256392627 
COG category[R] General function prediction only 
COG ID[COG0384] Predicted epimerase, PhzC/PhzF homolog 
TIGRFAM ID[TIGR00654] phenazine biosynthesis protein PhzF family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0134295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAC CTATTCCCAT CGTTGACACC TTCGCCGACG CCCGGTTCGC CGGGAACCCG 
GCCGCCGTCG CGGTGTGTCC GGAGTTCCCG GACGCCGCCG TGATGCAGGA CGCGGCGCAC
CGCATCGCCG TGCCCACGAC CGCGTTCGTG GTGCCGGACC CGGAGCGGCC CGCGGTGTAC
CGCATCCGCT GGTTCACCCC GCACGCCGAG ATCAACCTGT GCGGGCACGC GACGATCGCG
AGCACCCGGT GCTTGTCCGA TCTGCCGGAG AACGCCGGCG TCGACCGGTT GGAGTTCGTC
TCCGCCAACG GCGTGCTGTT CACTCAGTGG GCTGACGGCC TTGTCGCCAT CGACCTGCCC
GCCGACCCGC CAGTGCCCTG CGATCCGCCG CCGGAGCTGT TGGCGGCGCT GCGGGTGGGG
GAGGGGACCG GGATCGGTGT CGTCGGCTGC GCGTTGTCCA GCGACGACGT GCTCGTCGAG
CTGGAGTCGC CGGAAGCGGT CGCGGCGGTG CGTCCGGATT TCGAGGCGCT GGGACGGCTT
CCGTACCGGG GCAACGTGGT CACGGCACGG GACGCCTCCG ATTCCGACGT CGACTTCGCC
TCGCGGACCT TCTTTCCCTG CTACGGCGTG AACGAGGACC AGGTCTGCGT CACCGCGCAC
TGCAAGCTCG CGCCGTTCTG GGCGCGCAAG CTCGGCCGGG CGCGGCTGAC CGCGATCCAG
CCCAGCGCGC GCGGCGGACG GCTGGAGGTC GAGGATCTGG GGGAGCGGGT GCTGGTGCGG
GGGAGCGCCG TGCTGCGTCC GGAGCCCGCG GTGGTCGGCG TCGGCGAGCT GTTCGGGGCG
GTCCGGTGA
 
Protein sequence
MNRPIPIVDT FADARFAGNP AAVAVCPEFP DAAVMQDAAH RIAVPTTAFV VPDPERPAVY 
RIRWFTPHAE INLCGHATIA STRCLSDLPE NAGVDRLEFV SANGVLFTQW ADGLVAIDLP
ADPPVPCDPP PELLAALRVG EGTGIGVVGC ALSSDDVLVE LESPEAVAAV RPDFEALGRL
PYRGNVVTAR DASDSDVDFA SRTFFPCYGV NEDQVCVTAH CKLAPFWARK LGRARLTAIQ
PSARGGRLEV EDLGERVLVR GSAVLRPEPA VVGVGELFGA VR