Gene Caci_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3443 
Symbol 
ID8334796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3814832 
End bp3815962 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content69% 
IMG OID644956587 
Productfatty acid desaturase 
Protein accessionYP_003114190 
Protein GI256392626 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0150707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG TGCGGGCGAC CTATCTCCGC TTCCCCGCAT GGACGCAGCA CTTCTGGACC 
TGGCAGACCG GCAAGGCTCT GCCAGGCCAG AAGCCGCTCC TGCGGCACAC CTGGGCAAGC
TACCTGACGT TGACGCTGGC CCTGTTCCTC GGCGGACTGG CGGTCAGCGC CACCGCTGTG
GCAGCCGAGT ATCCCTACTG GTATCTGGCG TTGCTGGCCG GCTGGTTCCT GACCGTGTGC
GGCGCGCGCA TGATGGTGCT CGTCATCGCC CACCAGGCGC TGCACCGCCG GTTCTCCGGC
ACGGCGGCGC GCGACGGGTT CTGGGGCGAG ACCGTCACGG TCCTGAGCGT CTTCCACACG
TTCCGCGAGT TCAAGGAAGA ACACTTCGAC AACCACCACC GGCGCGAGAT CTTCGCCACC
GAGGCCGATC CGCCGGTACA GTTCCTGGAA GCACTCGGCT TCCGTCCGGA GATGAGCCGG
GACCAGCTGT GGCGCCGGGC GTGGATCGTG TTCTTCTCCC CGGCGTTCTA CGGCCGCAAC
GCCTACGGTC GGCTGCGCAG CAACATCGTC AACGGCCGCG TCCGCAAACT CGGCGTGCTG
ATCTGGCTCG GCGGATGGCT GTCGGTGCCG TTCTGGGCGC CGCACGGCGG CTGGGTTCTG
CTGCTGGCGT TCGTGATCCC GGTGATCCTG TTCGCGCAGC TGTCCGCGCT GCTGGACCGG
CTCGGCGAGC ACGAGTGGCT GGCGCCGCGC GTCCCCGAGT ACGGACACCG CTTCTACACC
GCCGCCAACA CCTCGGCGCG GTTCTGCGGC GCCCCGGTCC CGGCCCGGCA CACCCCGCTG
GCGCGGCAGA GCGCGCAGTG GCTGCGCTGG AGCGTCGCAA CACTCTGCTA CCACGTCCCG
GCCAGGCTGC TGGTCATCGT CGGCGACCTG CCCAACCACG ACTACCACCA CCGGTACCCG
TCCACCCCGG AGTGGACGAC GGCCGCCTAT GCCCGCCAGC GCGACATCGA CTCCGGCCGG
GACGGCGGAC CGCCGTACCA AGAGGTCTGG GGCGTGGGCG CGGCGATCGA CCGCCTCTTC
CGGAGCTGGG AGGGTTCCCC GACCGATGAA CCGACCTATT CCCATCGTTG A
 
Protein sequence
MTDVRATYLR FPAWTQHFWT WQTGKALPGQ KPLLRHTWAS YLTLTLALFL GGLAVSATAV 
AAEYPYWYLA LLAGWFLTVC GARMMVLVIA HQALHRRFSG TAARDGFWGE TVTVLSVFHT
FREFKEEHFD NHHRREIFAT EADPPVQFLE ALGFRPEMSR DQLWRRAWIV FFSPAFYGRN
AYGRLRSNIV NGRVRKLGVL IWLGGWLSVP FWAPHGGWVL LLAFVIPVIL FAQLSALLDR
LGEHEWLAPR VPEYGHRFYT AANTSARFCG APVPARHTPL ARQSAQWLRW SVATLCYHVP
ARLLVIVGDL PNHDYHHRYP STPEWTTAAY ARQRDIDSGR DGGPPYQEVW GVGAAIDRLF
RSWEGSPTDE PTYSHR