Gene Caci_3440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3440 
Symbol 
ID8334793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3812332 
End bp3813222 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content67% 
IMG OID644956584 
Productchlorinating enzyme 
Protein accessionYP_003114187 
Protein GI256392623 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 
TIGRFAM ID[TIGR01762] chlorinating enzymes 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.197593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTTG AGACCGACCG GAAGACCTTC GCCGAGCAGG GGTTCATCGG ACCGTTCACG 
CTCTGGGAGC CCGAGGAGAT GACCGCGTGG TGGAAGACGC AGCGCAAGGC GCTGCTCGAC
CCCGCCAAGA GCGCCCGCAA GGTGTTCGAC AACCCCGTGA ACTACGACCG CCACCTGGAC
ATCCCCGGAC TCAGTTCCCT GATCACCGAG CCGGAGATGG TCCGCCGGAT GCAGGCGCTG
ATCGGTCCGG ACGTGCTGTG CTGGCGCACC GAGTTCTTCC CCAAGAACCC CGGCGACTCC
GGCACCGGCT GGCATCAGGT CGAGACCTAC GCCATCGGCG AGACCTCCGA GGGCATGCTG
GAGGCCACCG AGCACTCCGA CGGCGTGCCG ATGGAGCTGA CGTGCTGGGT CGCCTTCACC
GAGGCCACCA AGGAGAACGG CTGCATGCGG CTGATCCCCG GCAGCCACCG GCAGTGGCGC
TACGACGAAC ACGCGCCGAT GAAGTGGAAC GGCGCGGCGC GCGACAACTC CTTCTTCGGC
TACAACTACG AAGACATCAA GATCGACAAG AACTGGGACC CGGACGCGCA GGATGTCCGG
GACGTGGAAA TGCGCCCCGG GCAGTTCATC ATCTTCACCG CGCGCACCAT CCACGGCTCC
CGCCCGAACA CCGCCAACCG GCAGCGTATG GGGCACGCGA TCCGCGTCGT CCCCACGCAC
GTCCGCGTCT ACGGCGGCAT GACCGGGTTC GACGAGTTCG GACACCACTT CGACCTGGCG
CGGCACGGCT GCGTGCTGGT CGCAGGACAG GACGACTACG GGCTCAACCG GCTCGCACAA
CACAACGCGT GGGGCGACCG GTTCACCCCG CTCGACCGGA TGGCGGTGTG A
 
Protein sequence
MDLETDRKTF AEQGFIGPFT LWEPEEMTAW WKTQRKALLD PAKSARKVFD NPVNYDRHLD 
IPGLSSLITE PEMVRRMQAL IGPDVLCWRT EFFPKNPGDS GTGWHQVETY AIGETSEGML
EATEHSDGVP MELTCWVAFT EATKENGCMR LIPGSHRQWR YDEHAPMKWN GAARDNSFFG
YNYEDIKIDK NWDPDAQDVR DVEMRPGQFI IFTARTIHGS RPNTANRQRM GHAIRVVPTH
VRVYGGMTGF DEFGHHFDLA RHGCVLVAGQ DDYGLNRLAQ HNAWGDRFTP LDRMAV