Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3436 |
Symbol | |
ID | 8334789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3805190 |
End bp | 3805708 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644956580 |
Product | Ricin B lectin |
Protein accession | YP_003114183 |
Protein GI | 256392619 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATGC GACGCAAGAT CGCGGCGATC GGAGTGTCGA TGGCGGCGGC GGTGTCCGCC GTCGTGGTGT CCAGCGGATC GGCCAGCGCC GCGCCGTTCC CGTTCCAGGA GATCGGGGTG TTCAACTCCA GCCACTGCCT GGACAACGCG ACCGAGATCG ACTCGGTCCT GCAGATGTGG TCGTGCACCG GCGGGGACGA GCAGCAATGG GCCGAGGAGT TCGACACCAA CACCAGCACC TACTACTTCG TCAACCTGAA CACGCACCGG TGCATCACCG CGCCGCCGGC GCAGGGCCGG GTCGACATGG AGCCGTGCCC CCTCAACTCC CCGCCGAACT CGCAGTCCCA GGAGTGGACG ATCTTCGACC ACGCCTCCGA CAACTCCTGG ATCGCCTGGC AGAACAAGGC GAGCCACCTG TGCCTGGACA CGCCGAGCGT GGGCAACGGC ACCGTGCTGG AAGCCGAGCC CTGCAACGTG GCCATCAGCT ACCAGAAGTT CACCGAGCGC GGGCGCTGA
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Protein sequence | MRMRRKIAAI GVSMAAAVSA VVVSSGSASA APFPFQEIGV FNSSHCLDNA TEIDSVLQMW SCTGGDEQQW AEEFDTNTST YYFVNLNTHR CITAPPAQGR VDMEPCPLNS PPNSQSQEWT IFDHASDNSW IAWQNKASHL CLDTPSVGNG TVLEAEPCNV AISYQKFTER GR
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