Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3422 |
Symbol | |
ID | 8334775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3780884 |
End bp | 3782509 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956566 |
Product | Radical SAM domain protein |
Protein accession | YP_003114169 |
Protein GI | 256392605 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGGTC TGGACTGCGT CGTGATCGGT TACAACGAAG GCGATTTCGA CGACTACCGG GTGATGTGCG AGCGCACCGG ACCCGGCACC CCCGAGTACC AGATCATGAG CTCGGAGCAC CTGGTCGTCG ACGGCGGCGC GATGCCCTGG CTGGAGGCGT TCTCCCGGCT GCGCACGCGC AGCACCGGAC GCACTGACCG CTACCACGTC GGCGAGGTCT ACAACCTCGC CGCGCTGTAT CTGACCAGCT ACCTGCGCCG CCACGGCCTG CGCGCCGAAC CGGTGTCGCT GTTCAGCGCC GAGCGGGACC GGCTGGCCGC GCTGCTGGCC GAGCGTCCCG CGGTGGTCGC CGTCACGACC ACCTTCTATG TCAACATCCT GCCAGTCATC GCAGTGGTCG AATTCATCCG CGAGCACGCG CCGGACAGCC ACATCGTGGT CGGCGGACCG CTGGTGGACA ACCTGTGCCT GTCCGGAATC ACCGACACGG TCCAGGACCT GTGCCACGCG ATGGGCGCCG ACTCCTACAT CCAGGAATCG CAAGGCGAGC ACTCGCTGGC GCAGCTGTGC CAGGCGGTCC AAGCCGGCGC CGACCTGGAC GCCGTCGACA ACCTCCTGCA CTGCCCCGAT GGAACCTGGG TCCGCACCCG CCGCCGCCCG GAGGCCAACA ACCTGGACGA GTGCTCGATC GACTGGTCCG GCTTCACCCC CGCCGAGATC GGCACGACCG CGCAACTGCG CACGGCACGC TCGTGCGCGT TCAAGTGCAG CTTCTGCGAC TACCCCTCGC GCGCCGGCGC CCTGACCACC GCCTCGATCG ACACCGTGCG CGCCGAGCTG CGCGCGCTGG CCGAACTCGG CGTGCGCAAC GTGGTCTTCG TCGACGACAC CTTCAACGTG CCGCCCAAGC GCTTCAAGGA CATGTGCCGC ATGATGATCG AGGAGGACCT CGGCCTGAAC TGGTACTCCT ACTTCCGCTG CTCCAACGCC CGCGACGACG AGGCCTTCGA CCTGGCAGCG GCCTCCGGCT GCGCCGGCGT CTTCCTCGGC ATCGAATCCG GCGACGGCGA TGTCCTGGCC GCCATGCACA AACTCGCCCA GGACTCCGAA TACCGCAGCG GCATCGCCCG CCTGAAAGAA CGCGCCATCA CCACCTTCGC CTCCATCATC GTCGGCTTCC CCGGCGAAAC CGAGAAGACG GTCCGCAACA CCATCGACTT CCTCAACGAA ACCGCCCCAG ACCTCTGGCG CGCCCAAGCC TGGTGGGCCA ACCCCCGCTC GCCGGTCTTC GCGAACAAGG ACCTGTGGTC GATCCAGGGT GAGGGCTACA CCTGGTCCCA CCACACCATG AACTCGGCCC AGGCCGCCGC CTACACCGAC GAGATGTTCG CCGCCGTCAC CGAATCAGTG TGGCTCCCGC TCTACGACTT CGACTTCTGG TCCCTCCCTT ACCTCGACGG CAAGGGCGTC AAAGCAGCAG AGCTCATCGC GCTCCTGCGC ACCAGCCAGC AATGGATGGC CGCCCGCAAG CAGGGCGCGG GCGATGTCGC ACTCGCCGAG GTGGAGCGGC GCCTGGCCGA GGGGATCGGC GGACTGACGG TCGCGCCGGC GAAGTTCGCC TACTGA
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Protein sequence | MGGLDCVVIG YNEGDFDDYR VMCERTGPGT PEYQIMSSEH LVVDGGAMPW LEAFSRLRTR STGRTDRYHV GEVYNLAALY LTSYLRRHGL RAEPVSLFSA ERDRLAALLA ERPAVVAVTT TFYVNILPVI AVVEFIREHA PDSHIVVGGP LVDNLCLSGI TDTVQDLCHA MGADSYIQES QGEHSLAQLC QAVQAGADLD AVDNLLHCPD GTWVRTRRRP EANNLDECSI DWSGFTPAEI GTTAQLRTAR SCAFKCSFCD YPSRAGALTT ASIDTVRAEL RALAELGVRN VVFVDDTFNV PPKRFKDMCR MMIEEDLGLN WYSYFRCSNA RDDEAFDLAA ASGCAGVFLG IESGDGDVLA AMHKLAQDSE YRSGIARLKE RAITTFASII VGFPGETEKT VRNTIDFLNE TAPDLWRAQA WWANPRSPVF ANKDLWSIQG EGYTWSHHTM NSAQAAAYTD EMFAAVTESV WLPLYDFDFW SLPYLDGKGV KAAELIALLR TSQQWMAARK QGAGDVALAE VERRLAEGIG GLTVAPAKFA Y
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