Gene Caci_3422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3422 
Symbol 
ID8334775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3780884 
End bp3782509 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content68% 
IMG OID644956566 
ProductRadical SAM domain protein 
Protein accessionYP_003114169 
Protein GI256392605 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGTC TGGACTGCGT CGTGATCGGT TACAACGAAG GCGATTTCGA CGACTACCGG 
GTGATGTGCG AGCGCACCGG ACCCGGCACC CCCGAGTACC AGATCATGAG CTCGGAGCAC
CTGGTCGTCG ACGGCGGCGC GATGCCCTGG CTGGAGGCGT TCTCCCGGCT GCGCACGCGC
AGCACCGGAC GCACTGACCG CTACCACGTC GGCGAGGTCT ACAACCTCGC CGCGCTGTAT
CTGACCAGCT ACCTGCGCCG CCACGGCCTG CGCGCCGAAC CGGTGTCGCT GTTCAGCGCC
GAGCGGGACC GGCTGGCCGC GCTGCTGGCC GAGCGTCCCG CGGTGGTCGC CGTCACGACC
ACCTTCTATG TCAACATCCT GCCAGTCATC GCAGTGGTCG AATTCATCCG CGAGCACGCG
CCGGACAGCC ACATCGTGGT CGGCGGACCG CTGGTGGACA ACCTGTGCCT GTCCGGAATC
ACCGACACGG TCCAGGACCT GTGCCACGCG ATGGGCGCCG ACTCCTACAT CCAGGAATCG
CAAGGCGAGC ACTCGCTGGC GCAGCTGTGC CAGGCGGTCC AAGCCGGCGC CGACCTGGAC
GCCGTCGACA ACCTCCTGCA CTGCCCCGAT GGAACCTGGG TCCGCACCCG CCGCCGCCCG
GAGGCCAACA ACCTGGACGA GTGCTCGATC GACTGGTCCG GCTTCACCCC CGCCGAGATC
GGCACGACCG CGCAACTGCG CACGGCACGC TCGTGCGCGT TCAAGTGCAG CTTCTGCGAC
TACCCCTCGC GCGCCGGCGC CCTGACCACC GCCTCGATCG ACACCGTGCG CGCCGAGCTG
CGCGCGCTGG CCGAACTCGG CGTGCGCAAC GTGGTCTTCG TCGACGACAC CTTCAACGTG
CCGCCCAAGC GCTTCAAGGA CATGTGCCGC ATGATGATCG AGGAGGACCT CGGCCTGAAC
TGGTACTCCT ACTTCCGCTG CTCCAACGCC CGCGACGACG AGGCCTTCGA CCTGGCAGCG
GCCTCCGGCT GCGCCGGCGT CTTCCTCGGC ATCGAATCCG GCGACGGCGA TGTCCTGGCC
GCCATGCACA AACTCGCCCA GGACTCCGAA TACCGCAGCG GCATCGCCCG CCTGAAAGAA
CGCGCCATCA CCACCTTCGC CTCCATCATC GTCGGCTTCC CCGGCGAAAC CGAGAAGACG
GTCCGCAACA CCATCGACTT CCTCAACGAA ACCGCCCCAG ACCTCTGGCG CGCCCAAGCC
TGGTGGGCCA ACCCCCGCTC GCCGGTCTTC GCGAACAAGG ACCTGTGGTC GATCCAGGGT
GAGGGCTACA CCTGGTCCCA CCACACCATG AACTCGGCCC AGGCCGCCGC CTACACCGAC
GAGATGTTCG CCGCCGTCAC CGAATCAGTG TGGCTCCCGC TCTACGACTT CGACTTCTGG
TCCCTCCCTT ACCTCGACGG CAAGGGCGTC AAAGCAGCAG AGCTCATCGC GCTCCTGCGC
ACCAGCCAGC AATGGATGGC CGCCCGCAAG CAGGGCGCGG GCGATGTCGC ACTCGCCGAG
GTGGAGCGGC GCCTGGCCGA GGGGATCGGC GGACTGACGG TCGCGCCGGC GAAGTTCGCC
TACTGA
 
Protein sequence
MGGLDCVVIG YNEGDFDDYR VMCERTGPGT PEYQIMSSEH LVVDGGAMPW LEAFSRLRTR 
STGRTDRYHV GEVYNLAALY LTSYLRRHGL RAEPVSLFSA ERDRLAALLA ERPAVVAVTT
TFYVNILPVI AVVEFIREHA PDSHIVVGGP LVDNLCLSGI TDTVQDLCHA MGADSYIQES
QGEHSLAQLC QAVQAGADLD AVDNLLHCPD GTWVRTRRRP EANNLDECSI DWSGFTPAEI
GTTAQLRTAR SCAFKCSFCD YPSRAGALTT ASIDTVRAEL RALAELGVRN VVFVDDTFNV
PPKRFKDMCR MMIEEDLGLN WYSYFRCSNA RDDEAFDLAA ASGCAGVFLG IESGDGDVLA
AMHKLAQDSE YRSGIARLKE RAITTFASII VGFPGETEKT VRNTIDFLNE TAPDLWRAQA
WWANPRSPVF ANKDLWSIQG EGYTWSHHTM NSAQAAAYTD EMFAAVTESV WLPLYDFDFW
SLPYLDGKGV KAAELIALLR TSQQWMAARK QGAGDVALAE VERRLAEGIG GLTVAPAKFA
Y