| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3408 |
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| Symbol | |
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| ID | 8334761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3759417 |
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| End bp | 3761669 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644956552 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003114155 |
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| Protein GI | 256392591 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.492526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCGA CGAAAGAGAC CAGCGCCCGG CGTCCCGGCA TGCCGAGTCC CTCCGATCAG
CTGCCCGAGC TCGATCGCCG ACAACGCGCG GTGCTGCGCG ACGTCGGACG CGAGTGGGGT
CGCGTCATCG AGGACCCGGA GTCCTGGCGC GACGCGCTGC CCGTCGATCC CACGCTCGAG
GCGTACCCGA CCTCTGTGAA GCCGTCGCGC TTCGGCCGGT TCGTGCCGGT CACGGCGCTG
TCCGATCGGG GGCACAGCGT CGAGACAGTG GAAGAGACCA CTGAAGCCGA GCGGCTGCCG
AGTGATCTTG CGACCGTGGG ACGCCGAGCT CGCCATCTCT TTCTGGGACA TCCGCTGCGC
AGTAGCGCCA TAGCGCACGA GCGCATGCGG AAGCTGATCG CGCTGCCGGT TCTCTCCGCC
GACGCTCTGT CCTCCGTCGC CTACGGACCC GAAGCCATGC TGGCGATCCT GGTCCTGGCC
GGCGCCGCCG GGCTGCGGAA CGCGCTGCCG ATCGCCGGCG TGATCGCGCT TCTCATGCTC
GCTGTCGGCG TCTCCTACCG GCAGACGATC CGCGCCTATC CCAAGGGCGG CGGGTCTTAC
ATCGTCGCCA GCGGCAATCT GGGGCGGGTC CCGGGACTGT TCGCGGCGGC CGGGCTGCTC
GTCGACTACA TCCTCACCGT AGCGGTGTCG GTGTCCGCCG GCGTCGCCGC GCTGACCTCC
GCGGTGCCGT CGTTGGCGGG CTCCACCGTG CCGATCGGTC TCGGGGTGAT CGCGGTACTG
CTCGCGGGGA ACCTGCGCGG GGTGCGGCAG GCCGGCGTGC TGTTCGCCGC ACCGACCTAT
GCCTTCATCC TGGCCATCGC GCTGCTGATC GGATTCGGGC TCGCCGACGC CGCCCGCGAC
AGCTTCCATG CGGCCGCTCC CCCGCATCTG GGCGTCACGC AAAGCGCCGG ACTGCTGCTG
ATCCTGCGCG CCTTCGCCTC CGGCGCGACC GCAATGACCG GCGTGGAAGC CATCTCCGAC
GCCGTCCCGA CGTTCACCAA GCCCGAGTGG CGCAACGCGC GCACGACGCT CACGATCATG
ATCGCCGTGC TGATCGTCAT GTTCGTGGGC ACGATCGTCG TGCTCCACCT GCGCGGCGTG
GTCCCGAACG CGGGTCAGAC GGCGCTGTCG CAGCTGGCTC GGCAGCTGTA CGGACCGGGC
GTGCTGTACG GCTTCACCCA GGCGGCGACC GCGGCGATCC TGCTGCTGGC GGCGAACACC
GCGTTCAACG ACTTCCCGCG CGTCCTGTTC TATCTCGCGC GCGACCGCCA GGCGCCGAGG
ATGTTCCTGC GCATGGGCGA CCGGCTGGCG TTCAGCAACG GGATCATCGT GCTGTCCGTC
ACCGCCGCCT TGCTCTACAC GGCTTTCGGC GGCAAGACCG ATCCGCTGAT CCCGCTGTTC
GCGGTCGGGG TGTTCCTGGC GTTCACGTTG TCCCAGGCGG GCATGGTCGC GCTGTGGTGG
CACGAGCGCG GCGACCGCTG GCGCCGCAGC CTGACCTTCA ACGCGGTCGG GATGACCATG
TCCGGCGCGG TCTTCGTCAC CGCGGGCGTC ACGAAGTTCC TGGAGGGGGC GTGGGTCGCG
GTGGTCGCCG TCCTGCTGTT CGTGGGACTC GCGCTGGCGA TCCGGCGCCA CTACGACCGC
GTCGCCGCCC TCGTCGAGCT GGGCCCTGAC ACGATCGAGG TTCCGCAGCC GTGCGTCACC
CCGCCGGCGC CCGACGAGGC GGCGGACAAG GCGACGGACG AAGCGACGGA CAGGGCGGCT
GCCGAGGACG AGGGCGAGGG CGAGGGCGAC CACGATCGGC AGACGCCCCA CCGGATCCGC
CACCTGACAG TGGTCCCGCT CTCCGTCCTC GACCGCCCGG CGATGCGCGC CCTCGCCTAC
GCCACCTCAC TCGGACAGCC GGTCCTGGTC GTGCACGTCA GCCCGACCGA GGACGAGGCC
AAGCGCTTCG GCGAGTACTG GCAGACCTGG GGCGCCCACC TCCCGCTGGA AGTCGTGGTG
TCGCCGTACC GCACCACCGT CACCCCGCTC GTGGACTCCC TGGAAGCCCT CGCCGGCCGC
CACTCCGGCC TCATCCTCAC GGTGATCCTC CCCGAGGTCG TGGTCGAGCA CTGGTGGCAG
TCCGTGCTGC ACGACCGGAT CGCCGCCCGG CTGCGGCGCA TGCTCCGCCA CCTGCCGAGC
GTCGTGATCA CCTCGGTCCC GTTCCATCTG TGA
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| Protein sequence | MAATKETSAR RPGMPSPSDQ LPELDRRQRA VLRDVGREWG RVIEDPESWR DALPVDPTLE
AYPTSVKPSR FGRFVPVTAL SDRGHSVETV EETTEAERLP SDLATVGRRA RHLFLGHPLR
SSAIAHERMR KLIALPVLSA DALSSVAYGP EAMLAILVLA GAAGLRNALP IAGVIALLML
AVGVSYRQTI RAYPKGGGSY IVASGNLGRV PGLFAAAGLL VDYILTVAVS VSAGVAALTS
AVPSLAGSTV PIGLGVIAVL LAGNLRGVRQ AGVLFAAPTY AFILAIALLI GFGLADAARD
SFHAAAPPHL GVTQSAGLLL ILRAFASGAT AMTGVEAISD AVPTFTKPEW RNARTTLTIM
IAVLIVMFVG TIVVLHLRGV VPNAGQTALS QLARQLYGPG VLYGFTQAAT AAILLLAANT
AFNDFPRVLF YLARDRQAPR MFLRMGDRLA FSNGIIVLSV TAALLYTAFG GKTDPLIPLF
AVGVFLAFTL SQAGMVALWW HERGDRWRRS LTFNAVGMTM SGAVFVTAGV TKFLEGAWVA
VVAVLLFVGL ALAIRRHYDR VAALVELGPD TIEVPQPCVT PPAPDEAADK ATDEATDRAA
AEDEGEGEGD HDRQTPHRIR HLTVVPLSVL DRPAMRALAY ATSLGQPVLV VHVSPTEDEA
KRFGEYWQTW GAHLPLEVVV SPYRTTVTPL VDSLEALAGR HSGLILTVIL PEVVVEHWWQ
SVLHDRIAAR LRRMLRHLPS VVITSVPFHL
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