Gene Caci_3401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3401 
Symbol 
ID8334754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3752577 
End bp3753959 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content73% 
IMG OID644956545 
Productserine/threonine protein kinase 
Protein accessionYP_003114148 
Protein GI256392584 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGTGG GCGAACGCTA CGTTCTGGGT CGAGTCATCG GAGAGGGGGC GACGGCGCGC 
GTCCACGAAG CCGAGGACAC CGTGTTGCGG CGCGAGGTGG CCGTGAAGGT CTTCCGCGAC
ATGGACATCG GTGACAGCAC GTCGGGGCGG GTCGACGAGG AAACCAGGAT CCTGACCCGC
CTCGCCCACC CGCACCTGCT GCCGGTGTAC GACTCGGGCC GCGACGCGGA CGCCCACCGC
TTCATCGTCA TGCCGCTGGT CCGGGGCACG ACGCTGGCGA AGCTGCTCGC CGAGGGACCG
ATCGACCCGC GCGAGGTGAA GCGGATCGGC GCGGCCCTGG CCGGCGCGCT GGCGCACATC
CACGCCCGCG GCATCGTCCA CCGCGACATC AAGCCCAGCA ACGTGCTCCT GGCCGAGGAC
GGGACGCCCT ACCTCGCCGA CTTCGGATTC GCGCACGCCG TCGACGGCCC GGCCCTGACC
GCCACCGACT GCATCGTCGG CACCGCCGGC TACCTCGCGC CCGAACAAGC CGAGGGCTTC
GCGGTGACAC CGGCGGTCGA CATCTACGCC TTGGGCCTCG TGCTGTTGGA GGCCCTGACC
GGCGAGCGCG AGTATCAGGG CACGCCGTTG GAACGCGCCA CAGCCAACGC GCTGCGAGCC
CCGCGCATCC CCGCGCGCCT CGGTCCGGGT TGGCTGAAGG TGCTGCGGAC GATGACGGCC
AAGACCGCGG CGGCACGTCC TACCGCGGAC GAAGTGAGCA CGCTGGTGGA CGCCGGCGAG
GACACGCTTC CCGCGCCCAC CGCGGTCGGC GACACGATGG AGCTTGCTGA GACAGGGTCT
CGCGGTGGCC TTCTCGCCGG CGCTTCGGAG CCTGGTTCGG CCGACTGGGC CGACTGGGCC
CACGGGTCCG GCGCTGCGGC AGCCTCTGTC CGCGCTGCCA CTGCCGACGC CGCCCCTGCC
CGCGCTGCCG ATGTCACGCG TCGTCAGCCT CGCCGTCGTC TGGCGCTGCT CGGCGCGGCT
GCCTGTACGG CCGCAGCCGT CGTCGGTCTG GGCGCCGACT GGCTCAGTTC CGGAGCCTCG
GCGGACACCG TCGGCCCGAG CGTGACGGCT CCCGGCGCCG GAGCGGCGGG TCCGCAGCAG
TCCACCGTCC CCTCGACGGG CTCGACGAGC CCGCCGAGTC CGGCAGGCCC GGCGAGCAGT
ACCGATCCGG GCGGTTCCGC CCTTCCGGCC TCTGCCGCAC ACAAGCCACC GAGCCAGAGC
CTGTCCGCAC CGCCGCCGAC CACACCGCCG CCGACCACAC CGGCTCAGGG ACCGGCACCG
ACGAAATGCC CACCCGGCGG CGGATCGAAG GGCAACGGCC ATGAGAAGCA CAAGTGCCCA
TGA
 
Protein sequence
MDVGERYVLG RVIGEGATAR VHEAEDTVLR REVAVKVFRD MDIGDSTSGR VDEETRILTR 
LAHPHLLPVY DSGRDADAHR FIVMPLVRGT TLAKLLAEGP IDPREVKRIG AALAGALAHI
HARGIVHRDI KPSNVLLAED GTPYLADFGF AHAVDGPALT ATDCIVGTAG YLAPEQAEGF
AVTPAVDIYA LGLVLLEALT GEREYQGTPL ERATANALRA PRIPARLGPG WLKVLRTMTA
KTAAARPTAD EVSTLVDAGE DTLPAPTAVG DTMELAETGS RGGLLAGASE PGSADWADWA
HGSGAAAASV RAATADAAPA RAADVTRRQP RRRLALLGAA ACTAAAVVGL GADWLSSGAS
ADTVGPSVTA PGAGAAGPQQ STVPSTGSTS PPSPAGPASS TDPGGSALPA SAAHKPPSQS
LSAPPPTTPP PTTPAQGPAP TKCPPGGGSK GNGHEKHKCP