| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3389 |
|---|
| Symbol | |
|---|
| ID | 8334742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3740360 |
|---|
| End bp | 3741226 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644956533 |
|---|
| Product | ribonuclease BN |
|---|
| Protein accession | YP_003114136 |
|---|
| Protein GI | 256392572 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00469689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.444789 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGCG AATCCGCCTG CGGATTGCCG GCGAGTAGGT ACGCACGCTG GCGCGAACGC
TTCAGCCGCA GCGTTATCGG AAATGTCTGG CGCGGCGGCA CCCAGCTGGA GTTGGTCCGG
CGGTCCATGG CCTTCGCGAC GTTGGGCCTG GTGGCGTTGG CACCGCTGCT CGTGGTGGTG
GCCGCGGTCA ATCCGGCCTC CCAGCAAGGG CTCGGACAAT GGGTCGTCGA CGGAATGGGG
CTTCCCCCGA ATACAGCAAC GCCGGTGCTG CATCTTTTCG CCTCGCATCA TCAGGCGACC
GGACAGGTCG GCGTCCTCGG TCTGGCATTG CTGGCGGCCT TCGGACTCGC CTTTGTGACA
GATGTTCAGC GCGGTTATCA AGGGATCTGG GAGATTCCCC CGGAATCGTG GCGGCAGGCG
TGGCGGCGCG CGGTGTGGCT GGCCGCGATG ATCGGCTATC TCGGCTTCGA GATGGAGAGC
GGCGCCCTGC TGCGGCACGG ACCGCTGGCC TCGGCCGGGC GGATCGTCAT CGTCGCCACG
GCCGGGCTGT TCTTCTTCTG GTGGGGTCAG TACTTCCTGC TCGCCGGACG TGTGCCCTGG
GGCTGGCTGC TGCCCGGCGC GCTGGCGACC GTCGCCGGGC TCAGCGGCCT GCGGGCCTTC
TCGGTGCTGG TGTTCAACCC GATGATGGTC TCCAGCGCGA GGGACTACGG GATGGTCGGC
GTGGTCCTGG TGGTGCTGTC CTGGCTGATC GGCGTGGGGT TCGTCATCTT CGGCGGTGCG
CTGGCCGGGC GGCACTATTG CGAGCACCGT GTTGGGATCC GTGCGGATCG CGAACCGGTA
CTGGATACCG AGCCGGGAGA CCTGTAG
|
|---|
| Protein sequence | MESESACGLP ASRYARWRER FSRSVIGNVW RGGTQLELVR RSMAFATLGL VALAPLLVVV
AAVNPASQQG LGQWVVDGMG LPPNTATPVL HLFASHHQAT GQVGVLGLAL LAAFGLAFVT
DVQRGYQGIW EIPPESWRQA WRRAVWLAAM IGYLGFEMES GALLRHGPLA SAGRIVIVAT
AGLFFFWWGQ YFLLAGRVPW GWLLPGALAT VAGLSGLRAF SVLVFNPMMV SSARDYGMVG
VVLVVLSWLI GVGFVIFGGA LAGRHYCEHR VGIRADREPV LDTEPGDL
|
|---|
| |