Gene Caci_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3388 
Symbol 
ID8334741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3739520 
End bp3740290 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content75% 
IMG OID644956532 
ProductMethyltransferase type 12 
Protein accessionYP_003114135 
Protein GI256392571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0166723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.464354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAAG ATCACGTCGA CGGCGTCGCC CCGAGCGCGA GCGCCGGCGC GACCGCGCCG 
TACACGGTGA CGGCGGAGTT CTACGACATC CTGCAGGCCG AGTCCGACCG CCGGCTGGCC
GAGCACCGGT TCGCCGCCGC CGCGAGCGCG GCGCGGGTGG GGATCGTCGA CGTCGGGGCG
GGCACCGGCA TCGTCACGGA GGTGCTGCTG GCCCGCTCGG CGGCGCCGGT CCACGCCGTC
GAGCCCGCCA CGCCGATGCG GGTGGCGCTG CTGACGCGCC TGGCCGCTCT GAGCGCGGAC
GTCCGCGCCC GCGTGACCGT CCACCCCGGC ACGCTCCAAG GCGCCGGGCT GACCCGGCAA
GCCGATCTCG TGGTGTGCGC GAACGTCGCC GGTGTCGTGG AGCCGCCCCT GCGCCGCTTG
CTCTGGCGAG CCGCGGCGGA GGCGCTGGTG CCCGGCGGGC AGCTCCTCGT CGACCCGCCA
CCGACCAGCG TGCCCGATGA GCCGACGCGG CGCGACCTGC CGCCGGTCCG GGTCGGGCCC
GACACCTACA GCGCGCAGGT GTGCCTCCGG CCGGACCGCG GCCTGCTGGC GGTCGCCTAC
ACCTACCGGG TCGAGCGCGG CGGCCGGACC GTCCGGCTGG AACATGAGGA ATTCACCATG
TGGCCGGCCT CGACCGACAC CGTGCACGAG GAGCTGCGGG AAGCCGGTTT CTCGGTCACG
GGTCCGGCGA ACGGCCTCGT CCGGGCGACC CGCGATCCGG ACCTGTGCTG A
 
Protein sequence
MIQDHVDGVA PSASAGATAP YTVTAEFYDI LQAESDRRLA EHRFAAAASA ARVGIVDVGA 
GTGIVTEVLL ARSAAPVHAV EPATPMRVAL LTRLAALSAD VRARVTVHPG TLQGAGLTRQ
ADLVVCANVA GVVEPPLRRL LWRAAAEALV PGGQLLVDPP PTSVPDEPTR RDLPPVRVGP
DTYSAQVCLR PDRGLLAVAY TYRVERGGRT VRLEHEEFTM WPASTDTVHE ELREAGFSVT
GPANGLVRAT RDPDLC