Gene Caci_3384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3384 
Symbol 
ID8334737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3736208 
End bp3736951 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content72% 
IMG OID644956528 
Producthypothetical protein 
Protein accessionYP_003114131 
Protein GI256392567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0455672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.824107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGA GGAACCGCAC CGCTCCCCGG GACCCTGATC ACAGCGCGGA GAACAGCGAG 
GCGCTGGCGG CATATGTTCT CAACGCCCTA GAGCCGGAGC AGCAGCAGGC GGTGCAGCAG
CATCTGCAGG ACTGCGACCT TTGTTACCTG GAGTACACGA GCCTCGGCGT GCTGCCCGGA
CTGCTGGACT CGCTGTCCCT CGAGGACATC AGAGAACTGA CAGACACGGT GGCGACCGAG
CAGTCCTCGG CCGCCACGGC CCGCCCCGAA CGCGCCGAGC GACCCGACCG GACCGAGCGC
CCGGCCCGGC CGTGGACGCG GCGGCGGCGC GCACTGCTGG CCGGCGGCGC CTTCTCCGCC
GCGATGGTCG CCACCGGCTT CGCCCCCGCG TACGCCGACT CGATCCCGGC CGCGCCGTCG
GCACAGCCCG GCGAGACCGC GAGATCAGCG GCGGACGCGC AGACCACCGC GGTCGGTCTG
GCGGTGTCGG CCGAACCTCT GCCGGACGAC CAGACGGCGC TGGACGTCGA GGTCCGCTCG
CCCCGAGCCC TGCGCGAATG CGTGCTCGAG GTGACCACGG ACGACGGCGC GATCATCGAA
GCCTGCCACT GGGCCGGCAC CCCGAGCACC CGCGTGGTGT TCAGCGGCGA CATCCCGCTG
GCAGCCGCAC GCCTGCGCGC GGTGGCGGTG CTCGCCGGCG ACGGCACGGT GTTGGCACGG
CAGGATCTGA GCGCCGGTCA GTAG
 
Protein sequence
MSSRNRTAPR DPDHSAENSE ALAAYVLNAL EPEQQQAVQQ HLQDCDLCYL EYTSLGVLPG 
LLDSLSLEDI RELTDTVATE QSSAATARPE RAERPDRTER PARPWTRRRR ALLAGGAFSA
AMVATGFAPA YADSIPAAPS AQPGETARSA ADAQTTAVGL AVSAEPLPDD QTALDVEVRS
PRALRECVLE VTTDDGAIIE ACHWAGTPST RVVFSGDIPL AAARLRAVAV LAGDGTVLAR
QDLSAGQ