| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3372 |
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| Symbol | |
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| ID | 8334725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3722951 |
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| End bp | 3724681 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644956516 |
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| Product | thiamine pyrophosphate protein TPP binding domain protein |
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| Protein accession | YP_003114119 |
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| Protein GI | 256392555 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG TCGCCGAACA GATCGTCACC GCCCTGGCCG ACCTGGGGGT CCGCACCGTC
TGGGGAGTGG TCGGGGACGC GCTCAACCCC GTGACGGACG CGATCCGCCG CGAAGAGCGC
ATCGAGTGGA TCGGCACCCG GCACGAGGAG GCGGCGGCCT TCGCCGCGAG CGCGCAGGCC
CAGCTGAGCG GCACCATCGG CGTGTGCATG GGAACCGTCG GACCGGGTTC GCTGCATCTG
CTGAACGGCC TGTACGACGC CAAGAAGTCG CACGCCCCGG TGCTGGCGAT CTGCGGCCAG
GTCCCCTCGG CCGAGTTGGG CGCCGAATAC TTCCAGGAGG TCGACAACGA CGCGGTGTTC
CGCGACGTCG CCGCCTTCCG GCACACGGTG ACCAGCGCGA GCCAGATGCC CCGGGTCCTG
GAGCAGGCGG TGCAGACGGC CTACGCCACC CCGGGCGTCT CGGTGCTCAC GCTGCCCGGC
GACATCGGCT CCGCGGAGGT CGCCAAGGAC AGCGCCGTCC ACATCACGCG CGTCCCGGCA
CGTCTGACAC CCGACGACGA CGAGATCACC CGCGCCGTGC GGCTCCTGGA CGACGCCAAG
ACCGTGACGA TGCTCGTCGG CGCCGGAGCC CGGGAATCGC GTGCCTCAGT GCTGCAACTG
GCCGATCGCC TGGCCGCTCC GATGGTCCTG ACTCTCAAGG CGAAGGAAGG GCTCGAAGAC
GACAACCCCT TCCAGATCGG CCAGAGCGGC CTGATCGGCA ACCCGGCGAC CCGCGAGGCG
TTCGAGTCCG CCGGCGCGCT GCTGATGATC GGCACGGACT TCCCGTATCC CGACTGGCTG
CCCCGCTCGA CGCCGACCGT CCAGATCGAC ACGCGCGCCG GCCACATCGG GCGCCGTACG
CCGGTCGACG TCGGCGTCGT CGGCGACGCG GGGCTGAGCA TCGCCGCGCT CCTGAACCGG
GTGCGCAGCA AGGACGATCG CAGCCATCTG GAAAAGGCAC GCTCGAGCTA CGAGGACTGG
CAAGGTCACC AGCGCCGCCT CACCGACCCG GAGTTCGACC AGAGCCTGGT GGGCAAGGTG
CGGTCTTGGC TCGACAACAC CGAGGACAAG ATCCGCCCCG AGGCGCTGGC CACGCTCATC
GACACGCACG CCGCCGAGGA CACCGTGTTC ACCACCGACA CCGGCATGTC CACGGTCTGG
CTCGCGCGCT GCGTGACGAT GCGCGGCAGC CGCCGCCTGA TCGGGTCCTT CAACCTCGGT
TCGATGGCGA ACGCCCTGCC GCACGCCCTC GGCGCCGCCG CCCTGGACCG GCAGCGGCAG
GTCGTCGCCT TCTGCGGCGA CGGCGGTCTG ACGATGCTGC TCGGCGACGT GCTCACCGCC
GTCGCCTACG ACCTGCCGGT CAAGCTCATC GTCTTCGACA ACGGCCGCCT GGGCATGGTC
AAGCTCGAGC AAGAGCAAGG CGGGCTCCCG GAGTTCGGCA CCGAGTTGGC CAACCCCGAC
CTGGCCGCCG TCGCCACCGC GATGGGCATG CCGGCCGCCC GGGTCACCGA ACCCGAGGCG
CTGGAGGCCG CTGTCCAGGC CGCACTCGCC TCACCGGGTC CGTACCTGCT CGACGTGGTC
ACCAATCCCG AAGAGATCGC GCTGCCGCCG AAGACAAGTA TCGACCAGGC GTGGGGGTTC
GCGATCGCGA AGATGAAGGA AGGGATTGTG AGCCGGGGCG CCAAGTCCTG A
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| Protein sequence | MTTVAEQIVT ALADLGVRTV WGVVGDALNP VTDAIRREER IEWIGTRHEE AAAFAASAQA
QLSGTIGVCM GTVGPGSLHL LNGLYDAKKS HAPVLAICGQ VPSAELGAEY FQEVDNDAVF
RDVAAFRHTV TSASQMPRVL EQAVQTAYAT PGVSVLTLPG DIGSAEVAKD SAVHITRVPA
RLTPDDDEIT RAVRLLDDAK TVTMLVGAGA RESRASVLQL ADRLAAPMVL TLKAKEGLED
DNPFQIGQSG LIGNPATREA FESAGALLMI GTDFPYPDWL PRSTPTVQID TRAGHIGRRT
PVDVGVVGDA GLSIAALLNR VRSKDDRSHL EKARSSYEDW QGHQRRLTDP EFDQSLVGKV
RSWLDNTEDK IRPEALATLI DTHAAEDTVF TTDTGMSTVW LARCVTMRGS RRLIGSFNLG
SMANALPHAL GAAALDRQRQ VVAFCGDGGL TMLLGDVLTA VAYDLPVKLI VFDNGRLGMV
KLEQEQGGLP EFGTELANPD LAAVATAMGM PAARVTEPEA LEAAVQAALA SPGPYLLDVV
TNPEEIALPP KTSIDQAWGF AIAKMKEGIV SRGAKS
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