Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3369 |
Symbol | |
ID | 8334722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3720960 |
End bp | 3721481 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956513 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003114116 |
Protein GI | 256392552 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.964336 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGATC CGAGCGAGTT CGATGCCTTC TATGCGGGCA GCGTCCGGAG GGTGACCAGT CACCTCTATG CGATGACCGG TAGTCGGGCC GAGGCTGAGG ACCTCGTGCA GGAGGCCTAT ACGCGGGCGT GGCAGAACTG GGGGAAGGTT TCCGGCTATG GGGATCCGGA GGGTTGGGTT CGCGCTGTCG CCTTCCGGAT CAGGGTCAGT GCGTGGCGGA AGGCGGTCAA CAGGGCGACT GCGCACCGGC GGCACGGGGT GCCGGAGCCG GATCCCGGGG CTAATCCGGA CTATGTCGCG ATCATCGCGG CGCTGCGGCG GATCAATCCG CAGCAGCGCC AGGCGGTGGT GCTCTACCAC CTGGTCGGGC TGTCGATAGA GCAGATAGCG CTGGAGACCG GAGTGGCGGT CGGGACGGTG AAGGCCCGAC TGTCCAGGGG GCGGCAGGCG TTGGCGCCGC ACCTGTCCGA TGCCGTCCCC GCCTTCCCGT CGTTCGCCAA GGAGGCATCC GGCCATGCCT GA
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Protein sequence | MRDPSEFDAF YAGSVRRVTS HLYAMTGSRA EAEDLVQEAY TRAWQNWGKV SGYGDPEGWV RAVAFRIRVS AWRKAVNRAT AHRRHGVPEP DPGANPDYVA IIAALRRINP QQRQAVVLYH LVGLSIEQIA LETGVAVGTV KARLSRGRQA LAPHLSDAVP AFPSFAKEAS GHA
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