Gene Caci_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3346 
Symbol 
ID8334699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3696761 
End bp3697192 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content72% 
IMG OID644956491 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_003114094 
Protein GI256392530 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.706534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCC CTGCCGATGA GACCCTGTTG CGCCGCGCGA TCGACATCGC CGCCCACGCC 
GTCACCCTCG GGGACGCCCC GTACGGCTCG CTGCTGGCCG ACGCGGACGG CACCATCCTG
ATCGAGGAGC ACAACACGGT GCGCCGCGAC GGCGACATCG CCGCGCATCC GGAGCTCAAG
CTCGCGCGCT GGGCCGCCCG CGAGCTGAGC CCGGAGGCCG CCGCGACGAC CACGATGTAC
ACGAGCTGCC AGCCGTGCGG GATGTGCACC GGCGGGATCG TGCGCTCCGG GCTCGGGCGG
GTCGTCTACG CGCTGGCCAC CGACCAGCTC GTCGAGCTGA ACCCGGGCTC GGAGTGGCCG
GTGGTGCCGC AGGACGGTCC GGCGCTGTTC GACGCGGCGC GGGTGCCGAT CGAGGCTTAC
TACAAGAAGT AG
 
Protein sequence
MLTPADETLL RRAIDIAAHA VTLGDAPYGS LLADADGTIL IEEHNTVRRD GDIAAHPELK 
LARWAARELS PEAAATTTMY TSCQPCGMCT GGIVRSGLGR VVYALATDQL VELNPGSEWP
VVPQDGPALF DAARVPIEAY YKK