| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3344 |
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| Symbol | |
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| ID | 8334697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3692375 |
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| End bp | 3694861 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644956489 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_003114092 |
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| Protein GI | 256392528 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.174312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.520145 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGTG CGGCAGAACG CGGGGCCGGA ACGGACGCCC CGGGGCGGTC GCGGCCCGAC
GGCTTCCCCG TCCAACCGGG CGTGCCTCGT CCCGAGGTCG GGACCGTGCC TGATCGCGCG
CCGGATCCTG CGCCGGACCG CGTGCCGGGT ATCGAAGCCG AGGCCGTGCC TGCTCCTGCT
CCCGTGGCCG ATCACGGCAC CGGGGAGCGA ATAGCCGCCT CGAACGCCGA GGGCGGCCCG
CTGTTCGGTC CGGAAGGCCC GATCCGGCCG ATCGACGAGA CCGAGCTGGA CCGCATCTGC
CTGCACAACC TGCTGTCGGC GTGCGCCGAC ATGATCTTCT TCAAGGACCG CGAGTCCCGT
TTCCTGCGCG TCAGCGACAG CGCCGCCGAG TTCAGCGGGA CCGATCCGGC GTCGATGATC
GGCAAGACGG TCCGCGACTA CTTCACCCCC GAGCACGCCG CCGCGGCCTT CGCCACGGAG
CGGGCGATCA TGAGCACCGG CCGTGCGCTC ACCGACTTCG AGGAGCCCCA CCTGCGGCCG
GGCACCCCGG AGGAGGAGAC GCTCAGCGCC AGCAAGCAGC CGCTGCGCGA CTTCGACGGC
CGGATCATCG GCACCTTCGG GATCAGCCGC GACATCACCG CGCGCAAGAT CTCCGAGCGC
GAGCTGAAGG CCCGCACCGC CGAGCTGGAC CGGGTCGGAC GCGAGCTCAA GACGCTGCTG
GACACCAGCC CGGACCTGAT GGCCCGGTTC GACCGGGACC TGCGCTGCAC CTACGCCAAC
CCGGCGGCCC GGGAGATCAC CGGCGTGGAG ATGCTCGGCC GGACCAGCCG CCAGCGCGGC
TACTCCGAGG ACTTCCTGGG GGTGTGGGAG GAGTCGCTGC GGCAGGTGCT GGAGACCGGA
CGGGACACCG ACCGGGAGTT CAGCGTCACC GTCGGCGGGC AGTACCGGTT CCTGCACACC
CGCTTCGTGC CGGAGCTCGA CGCCGACGGC GAGGTCACCA GCGTGCTGTC GGTCAGCCGC
GACCTGACCG ACCGGCGCCG GATCGAGGAG GCGCTGGCCG AGCAGGCGGT GCGCGACCCG
CTGACCGGGC TGGCGAACCG CACGCTGCTG GTCAGCCGGA TCAGCGAGGC GATCGAGTAC
AGCGGCGGCG CGGACGACCG GCTCGCCGTG CTCTTCCTGG ACCTGGACCG CTTCAAGCTG
GTCAACGACA GCCTCGGGCA CGCCGCCGGC GACGAGTTGC TGGCCGCGGT CGCCGACCGG
CTGCGCAAGG CGGTGCGCCG CGGCGACCTG GTGGCGCGGT TCGGCGGGGA CGAGTTCGTG
GTGCTGTGCG AGAACGTCGC CGGGCACGCC GAGGCCGCCT CGATCGCGCA GCGCGTCATC
GACTGCCTGA TCCGGCCCTT CGACTGCGCC GGCAAGCCGA TGCACGTGCG CACCAGCATC
GGCATCGCGC TGGCGCACGG CCCGGACACC ACCGTGGACG AGCTGCTGCG CGACGCGGAC
GCCGCGATGT ACCAGGCCAA GTCCGACGGC GCGGTCGCCG GCGGCTACCG GTTCTTCGAG
CCGGCCACGC ACGAGCGGGC CGTGCACCGC ATGAACCTGG AGCAGGACCT GCGCCAGGCG
GTCGAGCGCG GCGAGTTCAC GCTCGTCTAC CAGCCGATCG TGGCGCTCGA CGACGGCCGG
GTGACCGGCG CCGAGGCGCT GATCCGCTGG CGGCATCCCG AGCGCGGGCT GCTGACGCCG
GCGGCGTTCC TGGAGGTCGC CGAGGAGACG CAGCTGATCG TGCCGATCGG GCGCTGGGTG
CTGGACGAGG CGTGCCGGCA GCTGGCGGCG TGGAACGCGA TGCTGCCGCC GGGCTCTGAG
GGTGAGGCCG AGGGCGGCGC GGAGGTTGGG GCGGGGGTCG CGGCGGGAGT CGGCGCGGGG
GTCGCGGCGG GCGCCGGTTC CCGGCTGCCG CTGCTGGCGG TGAACCTGTC CAGCCGTCAG
CTGTCGCACG ATGGCGACCT GGTCACGCAG GTGGCGAAGG CGATCGCGCG GCACGGCGTC
CCAGCGGGGC GGATCTGCTT GGAGGTCACC GAGACGGCGG TCCACGAGGC GTCGCTGACC
GCGCGTTCGG CGCTCGCGGC GTTCTCCGCC GCCGGTATGA AGATCGCGCT GGACGACTAC
GGCACCGGCT ACTCCTCGCT GGGACACCTG CGCGACAACC CGGTCGATAC GCTGAAGATC
GACCGCGTCT TCATCAGCGG CCTGACCCGC AACCGCGGCG ACGACGCGAT CGTGGTCGCG
GTGATCACGC TGGCGCACGC ACTGGGGATG CGAGTCGTGG CCGAGGGCGT GGAGACGCCG
GAGCAGCGCG AGCGGCTGCG GGAGCTGGGG TGCGACTTCG CGCAGGGGCA TCTGTTCGCG
ATGCCGCTGT GCGCCGAGGA GTTCGGGGAG CTGCTGCGGA GCGGGGCTAC GGCGGTCGGG
GCGCTTTCTT GTAGCTGCGG GGTGTAG
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| Protein sequence | MTSAAERGAG TDAPGRSRPD GFPVQPGVPR PEVGTVPDRA PDPAPDRVPG IEAEAVPAPA
PVADHGTGER IAASNAEGGP LFGPEGPIRP IDETELDRIC LHNLLSACAD MIFFKDRESR
FLRVSDSAAE FSGTDPASMI GKTVRDYFTP EHAAAAFATE RAIMSTGRAL TDFEEPHLRP
GTPEEETLSA SKQPLRDFDG RIIGTFGISR DITARKISER ELKARTAELD RVGRELKTLL
DTSPDLMARF DRDLRCTYAN PAAREITGVE MLGRTSRQRG YSEDFLGVWE ESLRQVLETG
RDTDREFSVT VGGQYRFLHT RFVPELDADG EVTSVLSVSR DLTDRRRIEE ALAEQAVRDP
LTGLANRTLL VSRISEAIEY SGGADDRLAV LFLDLDRFKL VNDSLGHAAG DELLAAVADR
LRKAVRRGDL VARFGGDEFV VLCENVAGHA EAASIAQRVI DCLIRPFDCA GKPMHVRTSI
GIALAHGPDT TVDELLRDAD AAMYQAKSDG AVAGGYRFFE PATHERAVHR MNLEQDLRQA
VERGEFTLVY QPIVALDDGR VTGAEALIRW RHPERGLLTP AAFLEVAEET QLIVPIGRWV
LDEACRQLAA WNAMLPPGSE GEAEGGAEVG AGVAAGVGAG VAAGAGSRLP LLAVNLSSRQ
LSHDGDLVTQ VAKAIARHGV PAGRICLEVT ETAVHEASLT ARSALAAFSA AGMKIALDDY
GTGYSSLGHL RDNPVDTLKI DRVFISGLTR NRGDDAIVVA VITLAHALGM RVVAEGVETP
EQRERLRELG CDFAQGHLFA MPLCAEEFGE LLRSGATAVG ALSCSCGV
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