Gene Caci_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3343 
Symbol 
ID8334696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3691833 
End bp3692252 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content74% 
IMG OID644956488 
Productpyridoxamine 5'-phosphate oxidase-related FMN- binding 
Protein accessionYP_003114091 
Protein GI256392527 
COG category 
COG ID 
TIGRFAM ID[TIGR03618] PPOX class probable F420-dependent enzyme 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0628718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.731519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC CTGTGCCCAC TGATTCCGAC GGCATGGCGT TCTGGACCGA ACGTCACATC 
TGCAGCCTGG CGTCCGTGCG CCCCGACGGC ACGCCGCACC TGGTCCCGGT CGGCGCCGTG
TACGACCCGT CGACCGGGTT GGCGCGCATC ATCACCAGCG GCACCAGCAC CAAGGCGCGC
CGGATCCTGC GGGCCGGCAC GCTGCCGGTC GCGGTGACGC AGACCGACCG CGGCCGCTGG
ACCACGCTGG AGGGCGTGGC GCGGGTGAAT CAGGACCCGG AGGCGGTCGC CGACGCCGAG
CGACGGTACG CCGCGCGGTA CGGGGAGCCG CGGCCGAACC CGCTGCGGGT GGTCATCGAG
ATCGAGGTGC GGCGGGTGCT GGGGACGGTG AAGGTGCCGC TGCCGGGGGC GGCGCAGTAG
 
Protein sequence
MSDPVPTDSD GMAFWTERHI CSLASVRPDG TPHLVPVGAV YDPSTGLARI ITSGTSTKAR 
RILRAGTLPV AVTQTDRGRW TTLEGVARVN QDPEAVADAE RRYAARYGEP RPNPLRVVIE
IEVRRVLGTV KVPLPGAAQ