Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3342 |
Symbol | |
ID | 8334695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3691208 |
End bp | 3691900 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956487 |
Product | NAD(P)H dehydrogenase (quinone) |
Protein accession | YP_003114090 |
Protein GI | 256392526 |
COG category | [R] General function prediction only |
COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.241608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.325854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGTCC TGATAGTCCT CGACCATCCC TACACCCTTG CCTCGTCCGA GAACGTGCCG CACCGGCGTA GCTTCACCGC CGCTGTCGCC GCGGCGGCCA TCCGGGGTGC CGAAGCGGCG GGGCACGACG TCGACCTCAT CGACCTCGCC GCGGACGGCT TCTCGCCGGT GATGAGTGCC GCCGATCTGG TCGCGTGGCG TCAGGCGGGT GTCGTCGACC CGCAGGTAGC GGACTATCAG CGCCGCCTGA TGGCGGCCGA CCATCTGGTG TTCGCGTTCC CGGTGTGGTG GGAGGCGATG CCGGCGGCGA CCAAGGGGTT CCTGGACCGC GTTCTCACCA AGGGAGTGGT CTTCGAGGAG ATGGCCGGGG CGAGGGGCAA TCCGTTCAGC AATCTGATGC CGCGGCTCGG GGGTGTCACG GTGCTGTCGA TCATGACGAC GCCGGACAAG GCCTACCGGT GGTGGTTCCG CGATCCGCTG ACGAAGATCC TGTTCAAGGG GACGTTCGGC AAGATCGGCG TGAAGAATCT GACGTGGGTC AACTACGACA AGGTCGCCGA CCGGACGCCC GAGCGGCGCC GGCAGATGCT GACCGACACC GAGGCGCGCT TCGCCGCGAT GCCCGCTACT GCGCCGCCCC CGGCAGCGGC ACCTTCACCG TCCCCAGCAC CCGCCGCACC TCGATCTCGA TGA
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Protein sequence | MRVLIVLDHP YTLASSENVP HRRSFTAAVA AAAIRGAEAA GHDVDLIDLA ADGFSPVMSA ADLVAWRQAG VVDPQVADYQ RRLMAADHLV FAFPVWWEAM PAATKGFLDR VLTKGVVFEE MAGARGNPFS NLMPRLGGVT VLSIMTTPDK AYRWWFRDPL TKILFKGTFG KIGVKNLTWV NYDKVADRTP ERRRQMLTDT EARFAAMPAT APPPAAAPSP SPAPAAPRSR
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