Gene Caci_3342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3342 
Symbol 
ID8334695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3691208 
End bp3691900 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content68% 
IMG OID644956487 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_003114090 
Protein GI256392526 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.241608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.325854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTCC TGATAGTCCT CGACCATCCC TACACCCTTG CCTCGTCCGA GAACGTGCCG 
CACCGGCGTA GCTTCACCGC CGCTGTCGCC GCGGCGGCCA TCCGGGGTGC CGAAGCGGCG
GGGCACGACG TCGACCTCAT CGACCTCGCC GCGGACGGCT TCTCGCCGGT GATGAGTGCC
GCCGATCTGG TCGCGTGGCG TCAGGCGGGT GTCGTCGACC CGCAGGTAGC GGACTATCAG
CGCCGCCTGA TGGCGGCCGA CCATCTGGTG TTCGCGTTCC CGGTGTGGTG GGAGGCGATG
CCGGCGGCGA CCAAGGGGTT CCTGGACCGC GTTCTCACCA AGGGAGTGGT CTTCGAGGAG
ATGGCCGGGG CGAGGGGCAA TCCGTTCAGC AATCTGATGC CGCGGCTCGG GGGTGTCACG
GTGCTGTCGA TCATGACGAC GCCGGACAAG GCCTACCGGT GGTGGTTCCG CGATCCGCTG
ACGAAGATCC TGTTCAAGGG GACGTTCGGC AAGATCGGCG TGAAGAATCT GACGTGGGTC
AACTACGACA AGGTCGCCGA CCGGACGCCC GAGCGGCGCC GGCAGATGCT GACCGACACC
GAGGCGCGCT TCGCCGCGAT GCCCGCTACT GCGCCGCCCC CGGCAGCGGC ACCTTCACCG
TCCCCAGCAC CCGCCGCACC TCGATCTCGA TGA
 
Protein sequence
MRVLIVLDHP YTLASSENVP HRRSFTAAVA AAAIRGAEAA GHDVDLIDLA ADGFSPVMSA 
ADLVAWRQAG VVDPQVADYQ RRLMAADHLV FAFPVWWEAM PAATKGFLDR VLTKGVVFEE
MAGARGNPFS NLMPRLGGVT VLSIMTTPDK AYRWWFRDPL TKILFKGTFG KIGVKNLTWV
NYDKVADRTP ERRRQMLTDT EARFAAMPAT APPPAAAPSP SPAPAAPRSR