Gene Caci_3337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3337 
Symbol 
ID8334690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3686505 
End bp3687608 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content73% 
IMG OID644956482 
ProductABC transporter related 
Protein accessionYP_003114085 
Protein GI256392521 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCA CCCTGACCGC CCCCTCTTCC GCGTCCGCCG CGTCCGCGCC GTCGGTCGAA 
CTGGTCAAGC TCAGCCGCTC CTTCGGCGGC GTCGCAGCCC TCGACGGCCT GGACCTGACG
GTCGATCCGG GGACCCTGAT GTGTCTGCTG GGTCCCTCGG GCTGCGGCAA GACCACGGCG
CTGCGCATCA TCGCAGGGCT CGAACACGGC GACGGCGGCG AGGTCCGGGT CGGCGGGCAG
GACATCGCCC GCGTCCCGGC GAACAAGCGG GACATGGGCA TGGTGTTCCA GTCCTACAGC
CTGTTCCCGA ACCTGGACGC CCTCGACAAC GTCGCCTTCG GGCTGCGCAT GCGCGGCTGG
GGCGCGGCCA AGCGCCGCAC GCGGGCCGGG GAGCTGCTGG AGCTGGTGGG TCTGGCGGCG
CACGCCGAGA AGTACACGCA CCAGATGTCC GGCGGCCAGC AGCAGCGCGT GGCTTTGGCC
CGGGCGCTGG CGATCGAGCC GCGGGTGCTG CTGCTGGACG AGCCGCTGTC CGCGCTGGAC
GCGGTGGTCC GGGTGCAGCT GCGCGAGGAG ATCCGCTCGC TGCAGACCCG CCTGGGCATC
ACGACCGTGT TCGTCACGCA CGACCAGGAG GAGGCGCTCA GCGTCGCCGA CCAGGTCGCG
GTGATGCGCG CCGGACGCCT GGAGCAGTGT GCGGCGCCGG CGGACGTCTA CGCCGACCCG
GCGACCGCGT TCGTCGCGGA GTTCATCGGC ACGATGAACC GGCTGCCGGG GACCCTGGCC
GCCGACGGTC AGACCGTCGA GGTGGCGGGC CGCCGCCTGG TGGTGCGGGA GGCCGGACAG
CGATCAGGAC AGCGATCAGG ACAGCGATCA GGAGGGGAGG TCGCGGTCCT GATCCGCCCC
GAGGCGGTGC GGTTCGAGCC GTCCGAGGAC GGGGCGGCGA CGGTACGCCT GGCGGGGTTC
CGGGGTCCGA TCACGCGGAT CACGGCGGTC CTGCCGGACG GGACCGAGGT GCTGTCCGAC
GTGCCGAGCG CTTCGGCGGG GGAGCTGGTG CCTGGCCGGC GGGCTTCGGT GGTGCTGGAG
GACGCGCCGG TGATGGTGGT CTGA
 
Protein sequence
MTATLTAPSS ASAASAPSVE LVKLSRSFGG VAALDGLDLT VDPGTLMCLL GPSGCGKTTA 
LRIIAGLEHG DGGEVRVGGQ DIARVPANKR DMGMVFQSYS LFPNLDALDN VAFGLRMRGW
GAAKRRTRAG ELLELVGLAA HAEKYTHQMS GGQQQRVALA RALAIEPRVL LLDEPLSALD
AVVRVQLREE IRSLQTRLGI TTVFVTHDQE EALSVADQVA VMRAGRLEQC AAPADVYADP
ATAFVAEFIG TMNRLPGTLA ADGQTVEVAG RRLVVREAGQ RSGQRSGQRS GGEVAVLIRP
EAVRFEPSED GAATVRLAGF RGPITRITAV LPDGTEVLSD VPSASAGELV PGRRASVVLE
DAPVMVV