Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3337 |
Symbol | |
ID | 8334690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3686505 |
End bp | 3687608 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644956482 |
Product | ABC transporter related |
Protein accession | YP_003114085 |
Protein GI | 256392521 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCCA CCCTGACCGC CCCCTCTTCC GCGTCCGCCG CGTCCGCGCC GTCGGTCGAA CTGGTCAAGC TCAGCCGCTC CTTCGGCGGC GTCGCAGCCC TCGACGGCCT GGACCTGACG GTCGATCCGG GGACCCTGAT GTGTCTGCTG GGTCCCTCGG GCTGCGGCAA GACCACGGCG CTGCGCATCA TCGCAGGGCT CGAACACGGC GACGGCGGCG AGGTCCGGGT CGGCGGGCAG GACATCGCCC GCGTCCCGGC GAACAAGCGG GACATGGGCA TGGTGTTCCA GTCCTACAGC CTGTTCCCGA ACCTGGACGC CCTCGACAAC GTCGCCTTCG GGCTGCGCAT GCGCGGCTGG GGCGCGGCCA AGCGCCGCAC GCGGGCCGGG GAGCTGCTGG AGCTGGTGGG TCTGGCGGCG CACGCCGAGA AGTACACGCA CCAGATGTCC GGCGGCCAGC AGCAGCGCGT GGCTTTGGCC CGGGCGCTGG CGATCGAGCC GCGGGTGCTG CTGCTGGACG AGCCGCTGTC CGCGCTGGAC GCGGTGGTCC GGGTGCAGCT GCGCGAGGAG ATCCGCTCGC TGCAGACCCG CCTGGGCATC ACGACCGTGT TCGTCACGCA CGACCAGGAG GAGGCGCTCA GCGTCGCCGA CCAGGTCGCG GTGATGCGCG CCGGACGCCT GGAGCAGTGT GCGGCGCCGG CGGACGTCTA CGCCGACCCG GCGACCGCGT TCGTCGCGGA GTTCATCGGC ACGATGAACC GGCTGCCGGG GACCCTGGCC GCCGACGGTC AGACCGTCGA GGTGGCGGGC CGCCGCCTGG TGGTGCGGGA GGCCGGACAG CGATCAGGAC AGCGATCAGG ACAGCGATCA GGAGGGGAGG TCGCGGTCCT GATCCGCCCC GAGGCGGTGC GGTTCGAGCC GTCCGAGGAC GGGGCGGCGA CGGTACGCCT GGCGGGGTTC CGGGGTCCGA TCACGCGGAT CACGGCGGTC CTGCCGGACG GGACCGAGGT GCTGTCCGAC GTGCCGAGCG CTTCGGCGGG GGAGCTGGTG CCTGGCCGGC GGGCTTCGGT GGTGCTGGAG GACGCGCCGG TGATGGTGGT CTGA
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Protein sequence | MTATLTAPSS ASAASAPSVE LVKLSRSFGG VAALDGLDLT VDPGTLMCLL GPSGCGKTTA LRIIAGLEHG DGGEVRVGGQ DIARVPANKR DMGMVFQSYS LFPNLDALDN VAFGLRMRGW GAAKRRTRAG ELLELVGLAA HAEKYTHQMS GGQQQRVALA RALAIEPRVL LLDEPLSALD AVVRVQLREE IRSLQTRLGI TTVFVTHDQE EALSVADQVA VMRAGRLEQC AAPADVYADP ATAFVAEFIG TMNRLPGTLA ADGQTVEVAG RRLVVREAGQ RSGQRSGQRS GGEVAVLIRP EAVRFEPSED GAATVRLAGF RGPITRITAV LPDGTEVLSD VPSASAGELV PGRRASVVLE DAPVMVV
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