Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3333 |
Symbol | |
ID | 8334686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3682496 |
End bp | 3683257 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644956478 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003114081 |
Protein GI | 256392517 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCAGG AACCGAGATA CCGGCGGATC GCCGAAGAGC TGCGGCACGC CATCACCGAG CACGCGTACG GCCCGGGCGG CAAGCTGCCC AGCGAGGGGG CGCTGGCCGG ACAGTACGAG GTCTCGCGCG GCACGATCCG CCAAGCCCTG ATGCTGCTGC GCCAGGACGG CCTGGTCACC TCCCGGCGCG GCACCCGCCG GGTGGTCCTG GACGACGCCC CGGTGCAGGA CTTCGCCCAG ATGCAGAGCT TCGCCCGCTG GGCCCGCTCC ATCGGCGAGA CGCCCGAGGG CCGCGTGGTC GGTCAGGGCT GGCACCCCGC CGACCCCAAC GAGCAGCGCC ACTTGCGCAT CGACGCCGAC GCGCGGGTGC TGCACGTAAT GCGTCTCAGA CTCCTGTCAG GGCGCCCGGC GATGCTGGAG CGGACGGTGT ATCCGGAGCT GGCGGGCACG ATCGTGGAGA ATCTGGCCTC GGACACAGTG TCGGTCACCG AGTTCCTGGA GAGCGCCGGG ATCTTCGTGG CGGACGCCGA GCACACCATC GACCTGGTGC TGGCCGCACC GGAGGACGCC GAGCTGCTGG GCTGCGCGCC GGGGGACCCC CTGCTGCGCG AGCGGCGGCG GTCCACGGAC CCTGCGGGGG TGCCGCTGGA GTGGTCCGAG GACCGGTACG TGCCCGGCAG CGTGGCGTTC GTCGTGCACA ACTCGCTGGC TTCGACACCG ATGACGCGGC AGCACATGGT TCCGGGGAAC TCAGGATCCT GA
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Protein sequence | MTQEPRYRRI AEELRHAITE HAYGPGGKLP SEGALAGQYE VSRGTIRQAL MLLRQDGLVT SRRGTRRVVL DDAPVQDFAQ MQSFARWARS IGETPEGRVV GQGWHPADPN EQRHLRIDAD ARVLHVMRLR LLSGRPAMLE RTVYPELAGT IVENLASDTV SVTEFLESAG IFVADAEHTI DLVLAAPEDA ELLGCAPGDP LLRERRRSTD PAGVPLEWSE DRYVPGSVAF VVHNSLASTP MTRQHMVPGN SGS
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