Gene Caci_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3333 
Symbol 
ID8334686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3682496 
End bp3683257 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content72% 
IMG OID644956478 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003114081 
Protein GI256392517 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCAGG AACCGAGATA CCGGCGGATC GCCGAAGAGC TGCGGCACGC CATCACCGAG 
CACGCGTACG GCCCGGGCGG CAAGCTGCCC AGCGAGGGGG CGCTGGCCGG ACAGTACGAG
GTCTCGCGCG GCACGATCCG CCAAGCCCTG ATGCTGCTGC GCCAGGACGG CCTGGTCACC
TCCCGGCGCG GCACCCGCCG GGTGGTCCTG GACGACGCCC CGGTGCAGGA CTTCGCCCAG
ATGCAGAGCT TCGCCCGCTG GGCCCGCTCC ATCGGCGAGA CGCCCGAGGG CCGCGTGGTC
GGTCAGGGCT GGCACCCCGC CGACCCCAAC GAGCAGCGCC ACTTGCGCAT CGACGCCGAC
GCGCGGGTGC TGCACGTAAT GCGTCTCAGA CTCCTGTCAG GGCGCCCGGC GATGCTGGAG
CGGACGGTGT ATCCGGAGCT GGCGGGCACG ATCGTGGAGA ATCTGGCCTC GGACACAGTG
TCGGTCACCG AGTTCCTGGA GAGCGCCGGG ATCTTCGTGG CGGACGCCGA GCACACCATC
GACCTGGTGC TGGCCGCACC GGAGGACGCC GAGCTGCTGG GCTGCGCGCC GGGGGACCCC
CTGCTGCGCG AGCGGCGGCG GTCCACGGAC CCTGCGGGGG TGCCGCTGGA GTGGTCCGAG
GACCGGTACG TGCCCGGCAG CGTGGCGTTC GTCGTGCACA ACTCGCTGGC TTCGACACCG
ATGACGCGGC AGCACATGGT TCCGGGGAAC TCAGGATCCT GA
 
Protein sequence
MTQEPRYRRI AEELRHAITE HAYGPGGKLP SEGALAGQYE VSRGTIRQAL MLLRQDGLVT 
SRRGTRRVVL DDAPVQDFAQ MQSFARWARS IGETPEGRVV GQGWHPADPN EQRHLRIDAD
ARVLHVMRLR LLSGRPAMLE RTVYPELAGT IVENLASDTV SVTEFLESAG IFVADAEHTI
DLVLAAPEDA ELLGCAPGDP LLRERRRSTD PAGVPLEWSE DRYVPGSVAF VVHNSLASTP
MTRQHMVPGN SGS