Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3329 |
Symbol | |
ID | 8334682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3676869 |
End bp | 3679361 |
Gene Length | 2493 bp |
Protein Length | 830 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644956474 |
Product | ANTAR domain protein with unknown sensor |
Protein accession | YP_003114077 |
Protein GI | 256392513 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAGG ACGACATCGC GCCGCGTGAC GATGCCGAGC GCGCTGGACC GCGTGCCGAT GCCGAGGCCG CCGGGTCGCG CGACGGTGCC GAGCTCACCG CGTCGCGCGA CGATGCCGAG GGCGCCGCGT CGCGCGACGC CGCCGAGGGC GCCGCGCCGC ACGACGACGC CGAGCGCACC GCGCTGCGTG CGGCGGCGCG CGCCTTCGCC GACGAGCGTC GGCAGCTGCT GCACGACCAG CGCGAGCACC GCCGCGACGC GCTCGTCGAC CAGGCGGTCG GCGTGGTCAT GGCGCGCTCG GCGTGCGGTT CGGCCGAGGC GGTCGCGCAG CTGGCGGCGA TCGCCGAGCG CAGCCGGCGG CCGCTGGCCG ATGTCGCCGC CGACGTGGTG GCCGAGGCCT CGGGCCGGTC CGCGGAGCCC GCGGAGCGCT CCGACACGCT GCGGCTGCGG CCGGAGGTCG CGGGCCTGGA CCGGGCCACC GACGGCGACG ACCTGGCCCG CGTCCTGGTC GCCGAGGCGC TGGGCTTCTC CCATCCCACC GGCGCGGCCA TCGGGCTGCT GGATGATGAC GGGACCGTGG CGGTCGTCGG CTCGCACGGC TTTCCGGCGC GGGGGATCCG GCGCTGGCGG CGGATCCCCC CGGCCGTGGA CTGCTTGATC AACCGCGCGC TGCGAGCCGG GCGACCGGTC TGGACCGACG CCGGGACCGG CGACGCGCCG CCGCCCTTGG GCGAGCCGGC CGGCGCCGAC CGGGCCCAGA CCCGGGTCGC GGTGCCGGTG CGGTTCGGGC GCGCGCTGAT CGGTGCGGTG GAGCTGGCGT GGCCGCCGAA CGCCGAGCTT GATCAGCAGG CTCGGCGGCA GGCCGAGGCG GTGGTGCTCT CGGTGGGTCC GTCGTTGCTG CGGACGCTGG GACCTGAAGG GTCCGCGGCA TCAGTGGCAT CCGCGGCATC CGCGGCATCG GCAGCATCGG CGGCGAGCTC CGCCGGTTCT TCTGCCGCCG ACGACTCACC GTGGCAGGAC CTGCTGGATC TCATGGAACA GCCGGCGCTC GTGGTGAGCG AGGACCCCGC GGCTCCCGAC GACGTCCGCC GCTTCCGCGT GATCGCCCGC AATCAGCACG CTGCGGAGCT GGTGAGCCCG GTCGCCACCG ACGGCACCCT CGCCGAGGCC GCGCCCTGGC TGCTCGCCGA GGATCTGCCC GAGCGCCTGA TCGCTGTGCT GCACACCGGC GCGCCGTACC GGCTCCGGGT CCAGACCGGT CCGCTCGGCG TGGACTCGCT CACCGCGGTG CGCGTCGGCG CCGGGACGGT GATCGTGGTC TGCCATCGCG CCTCCTTGGA CCCGATCGCC GCCGACGGCA CGCTGGAGCG CCTCGCCCGC TTCGGGACCT GGCGCTGGGA CGTCGACAGC GACCGCGTGG CCTGGTCCGC CGAGGCGCTG GGGATCGTGG ACGCGCCGGG CTTGGGCGAC TCCGCCGGGA TCGACCGCCC GCCCTACACC GTGCACCCGG ACGACACCGA AGCCGAGCGC CGCTTCGTCA AGACCCTGAC GGTCGAACGC CGTCCCGCCG AGGCCGAGTT CCGGATCCTG CACTACGACG GCGAGCCGAC CCGCGTGCGG GTGGCGGCCG AGCCGGTCGG CGGGGAGGAG GACGCCGCCG AGTCCGGCGC TGTGTCCGGC GCGGTGGTCG GCGTGGTCCA GGACGTGACC GAGTGGCGCC GCGCCGAGAC CGGCCTGGAA GTCGCCCGCG TCCAGCTCGC CGCCCAACGC TCCCGCGCCG ACGCCGAACG CCAGCTGGCC TCGGCGCTCC AGCAGGCCGT CGTGCCCAGC GCGGCCCGCA ACCAGCCGCC GCGCAGCGGG GTGCAGATCG CCGCGCGCTA CCGCCCGGCC AGCGCCTCGG CCGGCGTCGG CGGGGACTGG TACTCGGTCT TCCCGCTGCG CGACGACAAG ATGCTGCTGG CGATCGGCGA CGTCGCCGGG CACGGCCTGC CCGCCGCCTC GGCGATGGCC GACCTGCACC ACGGACTGCG CGGCATGGCG CTGGCCGAGA CCCGCCCGGG CCGGCTGCTC ACGCTGCTCA ACGAGCTGGT CGAGACCATG CCGCAGTTCA CCATCGCCAG CGCCTGCGCG CTGCTGTGGG ATCCCGCGAC CCGCCGCCTG ACCTGGGGGA ACGCCGGGCA TCCGGCGCCG CTGCGGATCC GGGCCGGCGT GGCCACGCCG CTGTACGACG CGGTGGGACC GATGCTCGGC GCCGATCCGT ACGCCGAATA CGAGGACTGC GAAGCCGACG TGGCCAGCGG CGACGTGCTG CTGCTGTACA CCGACGGCCT AGTGGAGCGC CGCCGGGTCG GCGACGACGA AACCATCGCG CATCTGCTCC ACCAGACCAG GTATCCCGAC GCCGACCTGG ACCATTACGC CGACCGGATC CTCGACAGCG CGCGCTCGGA CACCGACGAC GACGTGTGCG TGCTGGCCGT CCGCTTCGAA TAG
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Protein sequence | MNEDDIAPRD DAERAGPRAD AEAAGSRDGA ELTASRDDAE GAASRDAAEG AAPHDDAERT ALRAAARAFA DERRQLLHDQ REHRRDALVD QAVGVVMARS ACGSAEAVAQ LAAIAERSRR PLADVAADVV AEASGRSAEP AERSDTLRLR PEVAGLDRAT DGDDLARVLV AEALGFSHPT GAAIGLLDDD GTVAVVGSHG FPARGIRRWR RIPPAVDCLI NRALRAGRPV WTDAGTGDAP PPLGEPAGAD RAQTRVAVPV RFGRALIGAV ELAWPPNAEL DQQARRQAEA VVLSVGPSLL RTLGPEGSAA SVASAASAAS AASAASSAGS SAADDSPWQD LLDLMEQPAL VVSEDPAAPD DVRRFRVIAR NQHAAELVSP VATDGTLAEA APWLLAEDLP ERLIAVLHTG APYRLRVQTG PLGVDSLTAV RVGAGTVIVV CHRASLDPIA ADGTLERLAR FGTWRWDVDS DRVAWSAEAL GIVDAPGLGD SAGIDRPPYT VHPDDTEAER RFVKTLTVER RPAEAEFRIL HYDGEPTRVR VAAEPVGGEE DAAESGAVSG AVVGVVQDVT EWRRAETGLE VARVQLAAQR SRADAERQLA SALQQAVVPS AARNQPPRSG VQIAARYRPA SASAGVGGDW YSVFPLRDDK MLLAIGDVAG HGLPAASAMA DLHHGLRGMA LAETRPGRLL TLLNELVETM PQFTIASACA LLWDPATRRL TWGNAGHPAP LRIRAGVATP LYDAVGPMLG ADPYAEYEDC EADVASGDVL LLYTDGLVER RRVGDDETIA HLLHQTRYPD ADLDHYADRI LDSARSDTDD DVCVLAVRFE
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