| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3328 |
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| Symbol | |
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| ID | 8334681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3672077 |
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| End bp | 3676525 |
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| Gene Length | 4449 bp |
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| Protein Length | 1482 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644956473 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_003114076 |
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| Protein GI | 256392512 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCCC CTGAGACCCG GCTGGACCGG CCGGCCTCGA CCGACCCGCG TCTGGAGCGG
ATCCTCGGCG CGCTGCGCGC CGTGCGCGAC GGCGACTTCC GCCGGCGCAT CGTCGTCAGC
GGGGACGACG TGGTGGCGGA GATCTGTGTG CTGTGCAACG ACATCGCCGA GGCGAACCAG
GGCTACCTGG CCGAGCTGGA GCGGGTCGGG GCGGCCGTGG GCCGGGACGG CGCGCTGGGC
CAGCGGCTGG CGCCGGGCAC CGGCGCCGGG GACTGGGAGC GCCAGCGCGA GACCGTCAAC
ACCCTGCTGG ACGACCTGGC CCGGCCGCTG CTGGACACCG GCCGGGTGCT CGCCGCGATC
GCCCAGGGCG ACCTGTCCCA GCAGGTGGTC GTGGACGGCC GGGGCGACCT GGCCGACGTC
GGCCGGACCC TGGACGACAT GCGCCTGACG CTGCGCACCC TGGCCTCGGA GGTCACCCGG
GTGGCCGGGG AGATCGGCAG CGACGGACGC CTCGGCGGCC AGGCAGAGGT CCCCGGCGCC
GCGGGCACCT GGAAGGACCT CACCGACTCG GTCAACCTGA TGGCCGGCAA CCTCACCGGC
CAGGTCCGCG ACATCGCGCA GGTCGCCACC GCGGTCGCCC GGGGCGACCT GACCCGGCAG
ATCACCGTCG ACGTGCGCGG CGAGCTGCTG GAGCTGAAGA CCACCCTGAA CACCATGGTG
AACCAGCTGT CCGGGTTCGC CGACGAGGTC ACCCGGGTGG CCCGCGAGGT CGGCAGCGAC
GGCATCCTGG GCGGCCAGGC GAAGGTCCCC GGCGTGGCCG GGACCTGGAA GGACCTCACC
GACTCGGTGA ACCTGATGGC CGGCAACCTG ACCAACCAGG TGCGCAGCAT CGCACGGGTG
GCCACCGCCG TGGCCTCCGG CGACCTGACC CAGACCATCG ACGTGGATGT GCGCGGGGAG
ATCCTGGAGC TCAAGGACAC CCTGAACACC ATGGTCGAGC AGCTGTCCGG GTTCGCCTCC
GAGGTGATCC GGGTGGCCCG CGAGGTCGGC ACCGAGGGCC GCCTCGGCGG CCAGGCACAG
GTCCCCGGGG TCGCCGGGCT CTGGCGCGAC CTCACCGACG CGGTGAACTC GATGGCCAAC
AACCTGACCA ACCAGGTGCG CAACATCGCG CAGGTCACCA CCGCCGTGGC GCAGGGCGAC
CTGGGCAAGA AGATCGACGT GGACGCCCGC GGCGAGATCC TGGAGCTGAA GACCACCATC
AACACCATGG TCGACCAGCT CTCCGGCTTC GCCGACGAGG TCACGCGCGT GGCCCGCGAG
GTCGGCACCG AGGGCAACCT GGGCGGCCAG GCGCGCGTGC GCGGCGCCTC GGGCACGTGG
AAGGACCTGA CCGACAACGT CAACGTCATG GCGAACAACC TGACCGGCCA GGTCCGCAGC
ATCGCGCGGG TCGCCACGGC GGTCGCTTCC GGCGACCTGA CCAAGAAGAT CACCGTGGAG
GCCAAGGGCG AGGTCGCGGC GCTCGCCGAG ACCTTCAACG GCATGGTCGA CACGCTCTCG
GCGTTCGCCG ACGAGGTGAC CCGCGTGGCC GGCGAGGTCG GCACCGAGGG CATGCTCGGC
GGCCAGGCGC GCGTGCCCGG CGTGGCCGGG ACCTGGAAGG AGCTCACCGA CCGGGTGAAC
GTGATGGCCG ACAACCTGAC CAGCCAGGTG CGGAACATCG CGCAGGTGAC CACCGCGGTC
GCCAACGGGG ACCTGACCCG CCGGATCGAC GTGGACGCGC GCGGCGAGAT CCTCGAGCTG
AAGACCACCC TGAACACGAT GGTGGACCGG CTCTCTGCCT TCGCCTCCGA AGTGACCCGC
GTCGCCCGCG AGGTCGGTAC GGAAGGCAAG CTCGGCGGTC AGGCCACTGT CGAGGACGTC
TCAGGGACCT GGCAGCGCCT CACCGAATCG GTGAACCAGC TCGCCTCCAA CCTGACCACG
CAGGTCCGCG CGATCGCCGA GGTCGCCACC GCGGTGACCG AGGGCGACCT GACCCGCGCG
ATCACCGTCG ACGCCTCCGG AGAGGTCGCC GACCTCAAGG ACAACATCAA CCAGATGATC
GCCAACCTGC GCGCGACCAC CAACGCCAAC CAGGAGCAGG ACTGGCTGAA CACCAACCTG
GCGCGCATCG CCGGTCTGCT CCCCGGGCGG CGCGACCTGG CCAGCGTCGC GGCCATGGTT
CTGGAGGAGC TGGCGCCGCT GGTCTCCGCG CACAGCGCCG CGTTCTTCCT CGCCGAGTCC
GAGGACGGAC CGCTGGGCTT CGCCGAGGAG GCCGCGGACG TCCGGCTGCG GATGATCGCA
GGGTTCGGCT ACGCCGCCGC CCCCGGCGAC GGCCCGGTCT TCGCCCCCGG GCAGGGACTG
GTCGGGCAGG TCGCGGTGAG CAAGAAGACG GTCGCGCTGA CCGGCGCGCC GGCCGGGTAC
GTGCCGATCC GCTCCGGGCT CGGGCAGACC GACGCCACCA ACGTCATCGT GCTCCCGGTG
CTCTTCGAAC GGCAGACGCT CGGCGTGATC GAGCTGGCCT CGGTCAACGT GTTCACCCAG
ACCCACCGCG ACTTCCTGGA GACGCTCAAG GAGACGATCG GCACCGCGGT CAACACCATC
ACCACCAACG TCCGCACCGA CGCGCTGCTG CGCGAGTCCC AGCGCCTGAC CACCGAGCTG
CAGAAGCGCC AGAGCGACCT GCAGGAGTCG AACAACGAGC TCGAGGACAA GGCGGCGCAG
CTCGCTCGGC AGAACAAGGA CATCGAGATC AAGAACACCG AGATCGAGCA GGCGCGCCTC
ACCCTGGAGG ACCGCGCGCA ACAGCTCGCC CTGGCGTCCA AGGTCAAGTC CGAGTTCATG
GCGAACATGT CGCACGAGCT GCGCACCCCG CTGAACAGCA TGCTGATCCT GGCCCGGCTG
CTGGCCGACA ACGTCGACAC CAACCTGACC CCGCGCCAGG TGGACTTCGC CCAGACCATC
CACTCGGCGG GCTCGGACCT GCTGGAGCTG ATCAACGACA TCCTGGACCT GTCCAAGATC
GAGGCCGGCC GGATGGAGGT GCAGAACGAG TCCTGGCCGA TCGCCGACCT GGCCGAGGGA
CTGGCCGCGA CGTTCCAGCC GCTGGCCGCC GAGAAGGGCC TGCGGCTGCG CGTGGACGTC
ACCGCCGGCG CGCCGGCCAC CGTCACCGCC GACAGCCAGC GCGTCCAGCA GATCCTGCGC
AACCTGCTGT CCAACGCGGT GAAGTTCACC GACACCGGCG AGGTGACGCT GCGGGTGACC
GCGGCGCGCG GCGCGCACGG CGAGCCGGCG ATCGCCTTCG CGGTCGTGGA CACCGGCATC
GGGATCGCCG AGGACAAGCT GGAGCTCATC TTCGAGGCCT TCCAGCAGGC CGACGGCACC
ACCAGCCGGC AGTACGGCGG CACCGGGCTG GGCCTGTCCA TCAGCCGCGA GCTGACCCGG
CTGCTCAGCG CCGAGCTGCG GGTCTCCAGC GCGCCGGGCC GGGGGAGCAC CTTCACCCTG
CAGCTCCCGA TCGAGCCGCC GGCCGCCGAC GCCAAGGTCG AGCCCGCCGG CACGGACCGT
CCCTCCGGCG CCGACGCCGG CGACGCGCAG GCGCCGGCCG CGGTCCTGGT CATGGAGCCG
GTCGGGGTCA CAACGCTGGC CGACGCGGTC GAGTCGGTCC TGGACGAGCT CACCGGCATC
AAGGGCCGGG TCGCGGTGAC CCGGCTGTCC CGGGCGGCCG ATCTGGACGG CGTGCTGGCC
GGCGGCGCGC GTCCGGTCTG CGCGGTCGTC GACCTCGGCT GTCCGGAGGC AGAGGTGCGC
GCCGTCCTGG ACGCCGTCAC GACCGGCGCC TCCAGCACCC CGGTCATGCT CTACGAATCG
GTGGCCGAGG ACGGCGCCGC CGACGCGCTG CGCCGCTCGG TCCGCGACGC CGCCCGCTGG
GAGGTCGCGC ACTCGGTCCC GCAGGTCGCC GAACGCGTGA CCCTGCACGT CCTGACCGGC
GCCCCGCGCC TGAGCGGACC CGGCTCCGAG CCGGACCGCC CGGGGCGGGA GCTGCCGCGC
TTCGACGGCC AGAAGGTCCT GGTCATCGAC GACGACATCC GCAACGTCTT CGCCCTCACC
AGCGCGCTGG AGCTGCACGG CCTCACCGTG GTCTACGCCG GCAACGGCCG GGAGGGCATC
GAGCTGCTCA AGCAGAACGA GGACGTGGCG CTGGCACTGA TGGACATCAT GATGCCCGGC
ATGGACGGCT ACGCCACCAC CGCCCGCATC CGCGCCCTGG ACGGCTTCCG CGACCTGCCG
ATCGTCGCGG TCAGCGCCAA GGCGATGAAG GGCGACCGCG AGAAGAGCCT GGCCGCCGGG
GCGAACGAGC ACGTCACCAA GCCAGTGGAC ATGGATCTGC TGCTGCGGCT GATCAAGGAT
CTGATCTGA
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| Protein sequence | MESPETRLDR PASTDPRLER ILGALRAVRD GDFRRRIVVS GDDVVAEICV LCNDIAEANQ
GYLAELERVG AAVGRDGALG QRLAPGTGAG DWERQRETVN TLLDDLARPL LDTGRVLAAI
AQGDLSQQVV VDGRGDLADV GRTLDDMRLT LRTLASEVTR VAGEIGSDGR LGGQAEVPGA
AGTWKDLTDS VNLMAGNLTG QVRDIAQVAT AVARGDLTRQ ITVDVRGELL ELKTTLNTMV
NQLSGFADEV TRVAREVGSD GILGGQAKVP GVAGTWKDLT DSVNLMAGNL TNQVRSIARV
ATAVASGDLT QTIDVDVRGE ILELKDTLNT MVEQLSGFAS EVIRVAREVG TEGRLGGQAQ
VPGVAGLWRD LTDAVNSMAN NLTNQVRNIA QVTTAVAQGD LGKKIDVDAR GEILELKTTI
NTMVDQLSGF ADEVTRVARE VGTEGNLGGQ ARVRGASGTW KDLTDNVNVM ANNLTGQVRS
IARVATAVAS GDLTKKITVE AKGEVAALAE TFNGMVDTLS AFADEVTRVA GEVGTEGMLG
GQARVPGVAG TWKELTDRVN VMADNLTSQV RNIAQVTTAV ANGDLTRRID VDARGEILEL
KTTLNTMVDR LSAFASEVTR VAREVGTEGK LGGQATVEDV SGTWQRLTES VNQLASNLTT
QVRAIAEVAT AVTEGDLTRA ITVDASGEVA DLKDNINQMI ANLRATTNAN QEQDWLNTNL
ARIAGLLPGR RDLASVAAMV LEELAPLVSA HSAAFFLAES EDGPLGFAEE AADVRLRMIA
GFGYAAAPGD GPVFAPGQGL VGQVAVSKKT VALTGAPAGY VPIRSGLGQT DATNVIVLPV
LFERQTLGVI ELASVNVFTQ THRDFLETLK ETIGTAVNTI TTNVRTDALL RESQRLTTEL
QKRQSDLQES NNELEDKAAQ LARQNKDIEI KNTEIEQARL TLEDRAQQLA LASKVKSEFM
ANMSHELRTP LNSMLILARL LADNVDTNLT PRQVDFAQTI HSAGSDLLEL INDILDLSKI
EAGRMEVQNE SWPIADLAEG LAATFQPLAA EKGLRLRVDV TAGAPATVTA DSQRVQQILR
NLLSNAVKFT DTGEVTLRVT AARGAHGEPA IAFAVVDTGI GIAEDKLELI FEAFQQADGT
TSRQYGGTGL GLSISRELTR LLSAELRVSS APGRGSTFTL QLPIEPPAAD AKVEPAGTDR
PSGADAGDAQ APAAVLVMEP VGVTTLADAV ESVLDELTGI KGRVAVTRLS RAADLDGVLA
GGARPVCAVV DLGCPEAEVR AVLDAVTTGA SSTPVMLYES VAEDGAADAL RRSVRDAARW
EVAHSVPQVA ERVTLHVLTG APRLSGPGSE PDRPGRELPR FDGQKVLVID DDIRNVFALT
SALELHGLTV VYAGNGREGI ELLKQNEDVA LALMDIMMPG MDGYATTARI RALDGFRDLP
IVAVSAKAMK GDREKSLAAG ANEHVTKPVD MDLLLRLIKD LI
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