| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3317 |
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| Symbol | |
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| ID | 8334670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3660266 |
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| End bp | 3661471 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644956462 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_003114065 |
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| Protein GI | 256392501 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTCTCGT CACGAGTTCC GGCGCGCCTG CGCGCCGCTG TGGCCATCGG CGCGGTGACC
GTGCTCGCGG CCGCCGGATG CAGCAGCAGC ACGTCCGGCA AGTCCGCCGC GAAGGGCGAC
TCGCCCATCA CCATCGGTCT GATCACCGCC CTGACCGGCA GCAACAAGGC CCTGGGTCCG
GACCACCTCA ACGGGTTCCA GCTCTACCTG GACAACCACG GCAACAAGCT CGGCGGCCAC
ACCGTCAAGC TCGACGTGGG CGACGAGGCC AACGGCGGCG CCGCGGCGGT GCCGGTGGCC
AAGAAGATGA TCGAGCAGGA CCACGTGCTG GCCATCGCCG GCATCGTGGC CACCCCGACC
ATCCAGGCCG TGGTGCCGAT CGCGACCGCG GCCGGGGTCC CGGTGGTCAA CACCGGCGGC
CGGCCGACCA TGAAGGACGT CTCGCACCTG TGGACCATGA GCTTCATGTC CACCGACCCC
GGCGGCGCGA TGGGCCCGTA CATGGCCCAG AACGTCGGCG GCTCGGTCTA CGCGTTCGGT
CCGGACTACC AGGGCGGCTA TGACCAGCTG CGCGGGTTCA CCGACTCCTT CGCCAAGGCC
GGCGGCAAGC TCGCCAACGA CGGCGGCAAG CCGACGTTCA CGCCGTTCCC GGCCACCTCG
GACTTCACGC CGTACCTGGC CAAGGTCAAG GCCTCCGGCG CCAAGGCGAT CTACTGCTTC
TACACCGGCG CCAGCGCGAT CGCCTTCGTG AAGGACTGGT CCCAGTCCGA CGCCAAGGAC
ATCCCGCTGT ACGCCGCCGG CTTCATCACC GAGGGCGGCG CGCTCAAGGC CGAGGGCACC
GCGGCCAACG GCATCATCAC CTCGATGAAC TACTCGCCGG ACATCTCCAG CGCAGCGAAC
CGCGCGTTCG TCTCGGCGTG GGGTCAGAAG TACAACGGCG AGGCGCCGCC GGCGACCGCG
ATGTACAGCT GGGACGCCGC CTCCGTGCTG GACCAGGCGA TCGCCAAGGC CGGCTCGAAC
CTGACGCCGG AGGCGATCAA CGCCGCGATC AAGGCGATGG GCCAGATCGA CAGCCCGCGC
GGTACCTGGC AGCTGTCCTC CGACACCCAC GTCCCGGTCC AGAAGTGGTA CCTGCGCAAG
GTGGAGATGG ACGGCACGGC GCTGGCCAAC GTCAAGGTCG GCGACCTGGC CACCATCGGC
AGCTGA
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| Protein sequence | MFSSRVPARL RAAVAIGAVT VLAAAGCSSS TSGKSAAKGD SPITIGLITA LTGSNKALGP
DHLNGFQLYL DNHGNKLGGH TVKLDVGDEA NGGAAAVPVA KKMIEQDHVL AIAGIVATPT
IQAVVPIATA AGVPVVNTGG RPTMKDVSHL WTMSFMSTDP GGAMGPYMAQ NVGGSVYAFG
PDYQGGYDQL RGFTDSFAKA GGKLANDGGK PTFTPFPATS DFTPYLAKVK ASGAKAIYCF
YTGASAIAFV KDWSQSDAKD IPLYAAGFIT EGGALKAEGT AANGIITSMN YSPDISSAAN
RAFVSAWGQK YNGEAPPATA MYSWDAASVL DQAIAKAGSN LTPEAINAAI KAMGQIDSPR
GTWQLSSDTH VPVQKWYLRK VEMDGTALAN VKVGDLATIG S
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