| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3309 |
|---|
| Symbol | |
|---|
| ID | 8334662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3651477 |
|---|
| End bp | 3652280 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644956454 |
|---|
| Product | alpha/beta hydrolase fold protein-1 |
|---|
| Protein accession | YP_003114057 |
|---|
| Protein GI | 256392493 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCA CCGTCACCAG CACCGTGACC TCCGCCGACG GCACCGCCAT CGCCTACAGC
ACGACCGGCG AGGGACCGGC CGTCATCGTC GTCGACGGCG CCCTGTGCCA CCGCTCGTTC
GGCCCGAGCG GCGGCATCGC CGAGCAGTTG GGCTCGGAGT TCACCGTCCA CACCTACGAC
CGGCGCGGCC GGGGCGGGAG CGGCGACGCG GACGCGTACT CCCCGCAGCG GGAAGTCGAG
GATCTGGCGG CGCTGATCCA GGCGGCCGGC GGACAGGCGT GCGTCGTCGG TTTCTCCTCC
GGCGGCGCCC TGGCGCTGCT GGGCGCCGCG GCGGACATCG GCGTGACCAA GGTGGCGTGC
TACGAGGCTC CCTACGTCAC CCAGCAATGG CACCGCGACT CGGCGCTGCG GTACACCGCC
GACCTGCACC AGGCGCTGGA CGCCGGACGC GTCGAGGAGA TGCCCGCGTT GTTCATGACG
CTCGTCGGCG TGCCGGCCGA GCAGGTGGCG GAGATGCGGC GCTCGCCGGT GTGGCCGATG
TTCACGGCGG TCGCCAAGAC CCTGACGTAC GACAACGCCG TCCTGGGCTA CGGCGCCGGC
GGCGCGGTCC CGACCGACGT GCTCGGCACG ATCGCCGTGC CGGTCCTGGC CATGGACGGC
GGCGCCAGCC CGGACATCCT GCGCGACCCC GCCGGGATCA TCGCCGAGGC CTGTCCGGAC
GGCGAGCGCG TGACGCTGCC GGAGCAGACG CACGAGGTGA GCGCGCAGGT CGTGAGTCCG
GTGCTGGCGA AGTTCTTCGC CTGA
|
|---|
| Protein sequence | MTSTVTSTVT SADGTAIAYS TTGEGPAVIV VDGALCHRSF GPSGGIAEQL GSEFTVHTYD
RRGRGGSGDA DAYSPQREVE DLAALIQAAG GQACVVGFSS GGALALLGAA ADIGVTKVAC
YEAPYVTQQW HRDSALRYTA DLHQALDAGR VEEMPALFMT LVGVPAEQVA EMRRSPVWPM
FTAVAKTLTY DNAVLGYGAG GAVPTDVLGT IAVPVLAMDG GASPDILRDP AGIIAEACPD
GERVTLPEQT HEVSAQVVSP VLAKFFA
|
|---|
| |