Gene Caci_3306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3306 
Symbol 
ID8334659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3648266 
End bp3649213 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content73% 
IMG OID644956451 
Productbeta-lactamase domain protein 
Protein accessionYP_003114054 
Protein GI256392490 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAT ACCCCTTCCC CGACCCGGTC GTCGAGACCT CCGGCGCCGT AGAGATCGCC 
TCCGACCTGG TGGTCGTGCC CAACCAGGAC GTCGATCTGG TCCCGAACAT CGGGGTGATC
GGCGGGACCC ACTCCGTCCT GGTGGTGGAC ACCGGGCTCG GTCCGCGCAA CGCGGCGCAG
GTCTTGGCCT TCGCCGCCGA GTACGCCAAG GGCCGCCGCC TGTACCTGAC GACCACGCAC
TTCCACCCCG AGCACGCCTT CGGCGCGCAG GTCTTCGCCG GCGAGGCGAC CTACCTGGTC
AACCGGGCGC AGGCCGACGA CCTGGCGCAG AAGGGCGCCG GCTACCTCGC CATGTTCACG
CAGCTCGGCG AACCGGTCGC GCGGGAGCTG GCCGGCACGC AGCTGCCCAC CCCCGACGTG
GTCTTCGACG ACGGCTACGA GCTGGACCTC GGCGGCCGCA CCGTGCGCCT GCGCCCGACC
GGCCGCGCCC ACAGCCGCGG CGACCAGGTG GTGACGGTCC CGGACGCCGG CGTGCTGTTC
ACCGGCGACC TGGCCGAGGC CGGGCAGTTC GCGATCTTCC CCTGGTTCCC GCCGCACGAC
ACCGACGTCT CGGGTCTGCG CTGGATCCGC GTGATGGAGC GGCTGGCCGC CGAGCCGCAC
CGCGTCGTGG TCCCCGGGCA CGGCGGCATC GGCGACGCGC GGCTGCTCGC CGAGGTCCGC
GACTACCTCA GCGAGCTGCG GGAGCAGACC TGGCGGCGGC GCGACTCGGC GATGTCCGAG
GAGACGGTGG TCGAGGAGGT CAGGGCGCTG ATGGTGGAGC GGCACCCGGA GTGGCGGATG
CGGGAGTGGA TCGAGCGCGG GGTCGGGTGT CTGTGTGCTG AGCACGAGGA GCTCGCTGCA
CATGAGGCGC GCACCGAGCA GGACGCGGAG CACGCCGCAG ACGCCTGA
 
Protein sequence
MAEYPFPDPV VETSGAVEIA SDLVVVPNQD VDLVPNIGVI GGTHSVLVVD TGLGPRNAAQ 
VLAFAAEYAK GRRLYLTTTH FHPEHAFGAQ VFAGEATYLV NRAQADDLAQ KGAGYLAMFT
QLGEPVAREL AGTQLPTPDV VFDDGYELDL GGRTVRLRPT GRAHSRGDQV VTVPDAGVLF
TGDLAEAGQF AIFPWFPPHD TDVSGLRWIR VMERLAAEPH RVVVPGHGGI GDARLLAEVR
DYLSELREQT WRRRDSAMSE ETVVEEVRAL MVERHPEWRM REWIERGVGC LCAEHEELAA
HEARTEQDAE HAADA